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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 11

   GeneLoc map region (16,287,721 - 20,291,524 bp) around gene/marker "SAA1"

   Explanation:
   SAA1 is located at 18,287,721-18,291,524 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
116316450 16316658 + GC11P016320



215987995 16761138 - SOX6
Exon structure
Hs.368226 55553 ENSG00000110693 SRY (sex determining region Y)-box 6
316378372 16378704 + GC11P016385



416379415 16379615 + GC11P016387



516470335 16472422 - GC11M016471



616505059 16506256 - AKR1B1P3
Exon structure

729347 ENSG00000213785 aldo-keto reductase family 1, member B1 pseudogene 3
716598398 16598682 + RN7SL188P
Exon structure

hugo943 ENSG00000241943 RNA, 7SL, cytoplasmic 188, pseudogene
816487328 16761138 - GC11M016487



916635306 16635334 + PIR48413
Exon structure




1016634679 16779901 + C11orf58
Exon structure
Hs.645792 10944 ENSG00000110696 chromosome 11 open reading frame 58
1116777572 16778428 + GC11P016777



1216778229 16778260 - GC11M016778



1316789662 16790764 - GC11M016793



1416798846 16802232 - GC11M016802



1516807840 16816870 - GC11M016807



1616828625 16828776 + GC11P016831



1716863800 16864134 + RN7SKP90
Exon structure

hugo837 ENSG00000199883 RNA, 7SK small nuclear pseudogene 90
1816909368 16909396 + GC11P016911



1916909407 16909438 + GC11P016909



2016910107 16910150 + GC11P016912



2116910162 16910192 + GC11P016910



2216799842 17035990 - PLEKHA7
Exon structure
Hs.12332 144100 ENSG00000166689 pleckstrin homology domain containing, family A member 7
2316927921 16927953 - GC11M016927



2416928299 16928327 + GC11P016928



2516928528 16928557 + GC11P016931



2616929528 16929571 + GC11P016930



2716929583 16929613 + GC11P016929



2816876436 17034889 - GC11M016876



2916995968 16996035 - ENSG00000251928
Exon structure


ENSG00000251928
3016996176 16996591 - RPL36AP37
Exon structure

729362 ENSG00000244398 ribosomal protein L36a pseudogene 37
3116996240 16996560 - GC11M017002



3217029425 17029515 - ENSG00000266493
Exon structure


ENSG00000266493
3317042246 17050044 + GC11P017042



3417073548 17074531 + OR7E14P
Exon structure
Hs.523504 10819 ENSG00000184669 olfactory receptor, family 7, subfamily E, member 14 pseudogene
3517071361 17071391 - GC11M017071



3617071403 17071446 - GC11M017073



3717072347 17072376 - GC11M017074



3817072615 17072646 - GC11M017072



3917072656 17072685 - GC11M017076



4017076459 17076554 + ENSG00000264378
Exon structure


ENSG00000264378
4117088667 17089834 + GC11P017091



4217095499 17095582 + ENSG00000221322
Exon structure


ENSG00000221322
4317096200 17096291 - SNORD14A
Exon structure

26822 ENSG00000272034 small nucleolar RNA, C/D box 14A
4417097324 17097415 - GC11M017114



4517097325 17097415 - SNORD14B
Exon structure

85388 ENSG00000201403 small nucleolar RNA, C/D box 14B
4617095936 17099334 - RPS13
Exon structure
Hs.446588 6207 ENSG00000110700 ribosomal protein S13
4717096682 17099015 - GC11M017118



4817099182 17099214 - GC11M017116



4917099182 17099214 - GC11M017115



5017099182 17099214 - GC11M017117



5117137198 17137310 - GC11M017141



5217137199 17137310 - ENSG00000201586
Exon structure


ENSG00000201586
5317159523 17159812 - RPL34P24
Exon structure

100271309 ENSG00000240808 ribosomal protein L34 pseudogene 24
5417099277 17229530 - PIK3C2A
Exon structure
Hs.175343 5286 ENSG00000011405 phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha
5517215036 17215855 + GC11P017216



5617214991 17215974 + RPL29P21
Exon structure

732199 ENSG00000213779 ribosomal protein L29 pseudogene 21
5717229653 17230826 + GC11P017230



5817230981 17236657 + GC11P017231



5917249798 17250745 + RPS2P40
Exon structure

91561 ENSG00000197149 ribosomal protein S2 pseudogene 40
6017229700 17371521 + NUCB2
Exon structure
Hs.654599 4925 ENSG00000070081 nucleobindin 2
6117297749 17317713 + GC11P017297



6217298285 17317713 + GC11P017304



6317353589 17371521 + GC11P017356



6417373273 17398888 + NCR3LG1
Exon structure
Hs.146274 374383 ENSG00000188211 natural killer cell cytotoxicity receptor 3 ligand 1
6517391859 17391885 + PIR55310
Exon structure




6617399620 17399646 + PIR55083
Exon structure




6717400937 17400963 + PIR40298
Exon structure




6817402196 17405078 + ENSG00000260196
Exon structure


ENSG00000260196
6917407610 17408297 - GC11M017407



7017406795 17410878 - KCNJ11
Exon structure
Hs.248141 3767 ENSG00000187486 potassium inwardly-rectifying channel, subfamily J, member 11
7117417460 17419055 - GC11M017417



7217439193 17447011 - GC11M017439



7317414432 17498449 - ABCC8
Exon structure
Hs.54470 6833 ENSG00000006071 ATP-binding cassette, sub-family C (CFTR/MRP), member 8
7417457219 17457728 - SDHCP4
Exon structure

100422598 ENSG00000255035 succinate dehydrogenase complex, subunit C pseudogene 4
7517452144 17464338 - GC11M017452



7617498451 17503911 + GC11P017498



7717515447 17518460 - GC11M017516



7817522619 17523596 - GC11M017522



7917515442 17565963 - USH1C
Exon structure
Hs.502072 10083 ENSG00000006611 Usher syndrome 1C (autosomal recessive, severe)
8017568920 17668697 + OTOG
Exon structure
Hs.688380 340990 ENSG00000188162 otogelin
8117716814 17718487 - ENSG00000255335
Exon structure


ENSG00000255335
8217716569 17719018 + ENSG00000254586
Exon structure


ENSG00000254586
8317741110 17743678 + MYOD1
Exon structure
Hs.181768 4654 ENSG00000129152 myogenic differentiation 1
8417750269 17750300 - GC11M017750



8517756359 17804602 + KCNC1
Exon structure
Hs.552896 3746 ENSG00000129159 potassium voltage-gated channel, Shaw-related subfamily, member 1
8617793841 17793955 + GC11P017805



8717795127 17795287 + GC11P017804



8817795943 17799369 + GC11P017806



8917800719 17804602 + GC11P017807



9017816331 17818197 + GC11P017819



9117809595 18034709 - SERGEF
Exon structure
Hs.32470 26297 ENSG00000129158 secretion regulating guanine nucleotide exchange factor
9217974499 17974613 + GC11P017977



9318021093 18034475 - GC11M018021



9418022089 18044478 - ENSG00000255448
Exon structure


ENSG00000255448
9518039111 18063973 - TPH1
Exon structure
Hs.591999 7166 ENSG00000129167 tryptophan hydroxylase 1
9618089427 18089677 + GC11P018089



9718091482 18103284 - GC11M018091



9818091482 18127638 - SAAL1
Exon structure
Hs.591998 113174 ENSG00000166788 serum amyloid A-like 1
9918111043 18112483 - GC11M018111



10018122973 18128393 + HIGD1AP5
Exon structure

100289300 ENSG00000255254 HIG1 hypoxia inducible domain family, member 1A pseudogene 5
10118128130 18128388 + GC11P018128



10218134019 18137679 - SAA3P
Exon structure
Hs.454496 6290 ENSG00000166787 serum amyloid A3 pseudogene
10318142542 18142577 + GC11P018143



10418143264 18143307 + GC11P018144



10518142502 18160027 + MRGPRX3
Exon structure
Hs.380177 117195 ENSG00000179826 MAS-related GPR, member X3
10618174824 18175802 + LOC645297
Exon structure

645297 ENSG00000254857
10718161733 18211042 - ENSG00000255470
Exon structure


ENSG00000255470
10818194384 18195827 + MRGPRX4
Exon structure
Hs.632138 117196 ENSG00000179817 MAS-related GPR, member X4
10918204286 18204314 - PIR44852
Exon structure




11018204623 18204712 + ENSG00000221037
Exon structure


ENSG00000221037
11118210435 18211041 - ENSG00000224002
Exon structure


ENSG00000224002
11218210451 18212785 + GLTPP1
Exon structure

645312 ENSG00000255138 glycolipid transfer protein pseudogene 1
11318212110 18212767 + GC11P018215



11418218204 18218892 + LOC645319
Exon structure

645319 ENSG00000254546
11518230685 18236109 + LOC494141
Exon structure
Hs.446327 494141 ENSG00000189332 Solute carrier family 25, member 51 pseudogene (est)
11618252896 18258440 - SAA4
Exon structure
Hs.1955 6291 ENSG00000148965 serum amyloid A4, constitutive
11718252902 18270221 - SAA2-SAA4
Exon structure

100528017 ENSG00000255071 SAA2-SAA4 readthrough
11818259780 18270221 - SAA2
Exon structure
Hs.731376 6289 ENSG00000134339 serum amyloid A2
11918269936 18270053 - RNA5SP333
Exon structure

hugo1750 ENSG00000200336 RNA, 5S ribosomal pseudogene 333
12018283568 18283598 + GC11P018304



12118283800 18284297 - GC11M018286



12218283432 18285048 + ST13P5
Exon structure
Hs.567697 144106 ENSG00000212789 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 5
12318287939 18288057 + GC11P018303



12418287940 18288057 + RNA5SP334
Exon structure

hugo1751 ENSG00000201695 RNA, 5S ribosomal pseudogene 334
12518287721 18291524 + SAA1
Exon structure
Hs.632144 6288 ENSG00000173432 serum amyloid A1
12618288455 18290866 + GC11P018305



12718297479 18297521 + GC11P018302



12818309438 18317592 - GC11M018309



12918300217 18343745 - HPS5
Exon structure
Hs.437599 11234 ENSG00000110756 Hermansky-Pudlak syndrome 5
13018333064 18343725 - GC11M018333



13118344114 18355156 + GC11P018344



13218343816 18388591 + GTF2H1
Exon structure
Hs.577202 2965 ENSG00000110768 general transcription factor IIH, polypeptide 1, 62kDa
13318373565 18380189 + GC11P018373



13418394180 18394431 + GC11P018394



13518397373 18397741 + GC11P018397



13618409334 18409407 + MIR3159
Exon structure

100423016 ENSG00000264603 microRNA 3159
13718416108 18418945 + GC11P018416



13818415935 18429972 + LDHA
Exon structure
Hs.2795 3939 ENSG00000134333 lactate dehydrogenase A
13918427156 18428278 + ENSG00000256006
Exon structure


ENSG00000256006
14018433853 18473605 + LDHC
Exon structure
Hs.654377 3948 ENSG00000166796 lactate dehydrogenase C
14118471659 18472415 - ENSG00000256734
Exon structure


ENSG00000256734
14218477371 18501147 + LDHAL6A
Exon structure
Hs.668877 160287 ENSG00000166800 lactate dehydrogenase A-like 6A
14318511786 18512502 - LOC100422666
Exon structure

100422666 ENSG00000256464
14418489883 18548779 - TSG101
Exon structure
Hs.523512 7251 ENSG00000074319 tumor susceptibility 101
14518505483 18548467 - GC11M018505



14618529155 18530367 - ENSG00000256588
Exon structure


ENSG00000256588
14718532590 18533022 - ENSG00000256361
Exon structure


ENSG00000256361
14818548579 18550760 + GC11P018548



14918553953 18558311 - GC11M018555



15018551156 18610294 - UEVLD
Exon structure
Hs.407991 55293 ENSG00000151116 UEV and lactate/malate dehyrogenase domains
15118591445 18610294 - GC11M018593



15218610405 18612500 - GC11M018613



15318617001 18621230 - LOC100129966
Exon structure

100129966 ENSG00000256282
15418610329 18631802 + GC11P018610



15518621334 18631802 + SPTY2D1-AS1
Exon structure
Hs.585529 100506540 ENSG00000247595 SPTY2D1 antisense RNA 1
15618627948 18656338 - SPTY2D1
Exon structure
Hs.745113 144108 ENSG00000179119 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
15718657172 18657809 + GC11P018657



15818686477 18688031 + LOC100506569
Exon structure

100506569 ENSG00000257043
15918714669 18726332 + TMEM86A
Exon structure
Hs.502100 144110 ENSG00000151117 transmembrane protein 86A
16018722587 18722615 + PIR46171
Exon structure




16118725852 18747777 - IGSF22
Exon structure
Hs.434152 283284 ENSG00000179057 immunoglobulin superfamily, member 22
16218728084 18762115 + ENSG00000254966
Exon structure


ENSG00000254966
16318743349 18747721 - GC11M018743



16418756481 18756510 - PIR60589
Exon structure




16518749475 18814268 - PTPN5
Exon structure
Hs.79092 84867 ENSG00000110786 protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
16618825955 18826033 - ENSG00000265940
Exon structure


ENSG00000265940
16718857752 18858631 + LOC100420123
Exon structure

100420123

16818885096 18886056 - LOC441592
Exon structure

441592 ENSG00000254529
16918892534 18895009 - LOC645397
Exon structure

645397 ENSG00000255511
17018908471 18909664 - LOC390098
Exon structure

390098 ENSG00000254541
17118931981 18932943 - LOC390099
Exon structure

390099 ENSG00000255536
17218955360 18961054 - MRGPRX1
Exon structure
Hs.711459 259249 ENSG00000170255 MAS-related GPR, member X1
17318956532 18961268 + ENSG00000255244
Exon structure


ENSG00000255244
17418971994 18979430 - LOC645415
Exon structure

645415 ENSG00000254738
17518993283 18998617 - LOC390101
Exon structure

390101 ENSG00000254720
17619051238 19051985 - LOC100420121
Exon structure

100420121 ENSG00000255424
17719076002 19082228 - MRGPRX2
Exon structure
Hs.350566 117194 ENSG00000183695 MAS-related GPR, member X2
17819138646 19197969 + ZDHHC13
Exon structure
Hs.188569 54503 ENSG00000177054 zinc finger, DHHC-type containing 13
17919203578 19232120 - CSRP3
Exon structure
Hs.83577 8048 ENSG00000129170 cysteine and glycine-rich protein 3 (cardiac LIM protein)
18019247067 19247625 - GC11M019247



18119245610 19263167 - E2F8
Exon structure
Hs.523526 79733 ENSG00000129173 E2F transcription factor 8
18219218322 19302973 + ENSG00000255308
Exon structure


ENSG00000255308
18319296076 19296816 - PCNAP4
Exon structure

390102 ENSG00000254544 proliferating cell nuclear antigen pseudogene 4
18419321430 19329905 + ENSG00000255160
Exon structure


ENSG00000255160
18519372361 19372574 + GC11P019381



18619372361 19372574 + GC11P019380



18719402031 19406561 + NAV2-IT1
Exon structure

100874305 ENSG00000255270 NAV2 intronic transcript 1 (non-protein coding)
18819423418 19423528 - GC11M019427



18919423419 19423528 - RNA5SP335
Exon structure

hugo1752 ENSG00000200687 RNA, 5S ribosomal pseudogene 335
19019524219 19528776 - NAV2-AS5
Exon structure
Hs.434602 100874012 ENSG00000255043 NAV2 antisense RNA 5
19119532437 19545625 - NAV2-AS4
Exon structure
Hs.132600 399876 ENSG00000254622 NAV2 antisense RNA 4
19219596857 19596919 + MIR4486
Exon structure

100616118 ENSG00000265210 microRNA 4486
19319612703 19612838 - ENSG00000207407
Exon structure


ENSG00000207407
19419612747 19612838 - GC11M019615



19519618340 19618652 + GC11P019624



19619618340 19618652 + GC11P019625



19719732480 19736146 - LOC100126784
Exon structure
Hs.64341 100126784 ENSG00000270607 Uncharacterized LOC100126784 (est)
19819735698 19735777 + GC11P019742



19919735698 19735777 + GC11P019741



20019372271 20143147 + NAV2
Exon structure
Hs.639428; Hs.502116; Hs.639427 89797 ENSG00000166833 neuron navigator 2
20119761880 19761910 + GC11P019761



20219781550 19781629 - MIR4694
Exon structure

100616426 ENSG00000264309 microRNA 4694
20319798997 19799063 + GC11P019810



20419798997 19799063 + GC11P019809



20519799453 19799528 + GC11P019808



20619799453 19799528 + GC11P019811



20719880941 19880984 - GC11M019880



20819881868 19881897 - GC11M019881



20919882096 19882127 - GC11M019882



21019882138 19882166 - GC11M019883



21119882508 19882540 + GC11P019882



21220000245 20002883 - NAV2-AS3
Exon structure

100874013 ENSG00000254542 NAV2 antisense RNA 3
21320044387 20044678 + GC11P020051



21420044387 20044678 + GC11P020052



21520048801 20066537 + GC11P020053



21620066436 20066512 + GC11P020070



21720065392 20070849 - NAV2-AS2
Exon structure

100874014 ENSG00000254453 NAV2 antisense RNA 2
21820065375 20070932 - GC11M020067



21920128791 20136226 + GC11P020128



22020140788 20140814 + PIR54389
Exon structure




22120141230 20142178 - NAV2-AS1
Exon structure

100874015 ENSG00000254894 NAV2 antisense RNA 1
22220145064 20151881 + GC11P020146



22320155177 20157011 + GC11P020158



22420177701 20182159 - DBX1
Exon structure
Hs.558604 120237 ENSG00000109851 developing brain homeobox 1