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  Chromosome 11

   GeneLoc map region (25,676,440 - 29,743,605 bp) around gene/marker "BDNF"

   Explanation:
   BDNF is located at 27,676,440-27,743,605 bp

    [ GeneLoc Home Page ]


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Start
(bp)
End
(bp)
Strand
Gene
Unigene cluster
Entrez Gene Id
Ensembl Id
Description
125756317 25803305 + ENSG00000254456
Exon structure


ENSG00000254456
225945735 25948355 + ENSG00000254754
Exon structure


ENSG00000254754
326023545 26023571 - PIR46294
Exon structure




426067531 26069269 + LOC100533706
Exon structure

100533706 ENSG00000255086
526210670 26229894 + ENSG00000255243
Exon structure


ENSG00000255243
626307258 26309554 - ENSG00000254819
Exon structure


ENSG00000254819
726210829 26684836 + ANO3
Exon structure
Hs.91791 63982 ENSG00000134343 anoctamin 3
826448598 26448959 + ENSG00000255505
Exon structure


ENSG00000255505
926524764 26526329 + GC11P026526



1026580579 26593815 - MUC15
Exon structure
Hs.407152 143662 ENSG00000169550 mucin 15, cell surface associated
1126688566 26744974 - SLC5A12
Exon structure
Hs.148907 159963 ENSG00000148942 solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12
1226964239 26964265 - PIR54616
Exon structure




1326998453 26998480 - PIR40698
Exon structure




1427015628 27018634 + FIBIN
Exon structure
Hs.712718 387758 ENSG00000176971 fin bud initiation factor homolog (zebrafish)
1527062921 27077059 + GC11P027068



1627062921 27077059 + GC11P027067



1727062947 27077059 + GC11P027069



1827076881 27077059 + GC11P027098



1927062272 27149356 + BBOX1
Exon structure
Hs.591996 8424 ENSG00000129151 butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1
2027147800 27147826 + PIR47255
Exon structure




2127148998 27149235 + GC11P027151



2227068733 27241660 - ENSG00000254560
Exon structure


ENSG00000254560
2327238580 27240315 + GC11P027240



2427352374 27385415 - CCDC34
Exon structure
Hs.143733 91057 ENSG00000109881 coiled-coil domain containing 34
2527387508 27494334 - LGR4
Exon structure
Hs.502176 55366 ENSG00000205213 leucine-rich repeat containing G protein-coupled receptor 4
2627489859 27490400 + GC11P027491



2727493276 27503980 + ENSG00000254862
Exon structure


ENSG00000254862
2827505366 27505738 + RPL37AP7
Exon structure

100131730 ENSG00000242527 ribosomal protein L37a pseudogene 7
2927515965 27528326 - LIN7C
Exon structure
Hs.91393 55327 ENSG00000148943 lin-7 homolog C (C. elegans)
3027543151 27543273 - GC11M027546



3127543152 27543273 - RNA5SP339
Exon structure

100873602 ENSG00000212289 RNA, 5S ribosomal pseudogene 339
3227574145 27574173 + PIR40346
Exon structure




3327603166 27603647 + RPS25P1
Exon structure

283114
ribosomal protein S25 pseudogene 1
3427603227 27603602 + ENSG00000240036
Exon structure


ENSG00000240036
3527528385 27719721 + BDNF-AS
Exon structure
Hs.675323 497258 ENSG00000245573 BDNF antisense RNA
3627634830 27635021 + GC11P027636



3727639173 27656174 - LINC00678
Exon structure

101410541 ENSG00000254934 long intergenic non-protein coding RNA 678
3827679988 27720994 - GC11M027695



3927679970 27721180 - GC11M027694



4027679970 27721764 - GC11M027693



4127679970 27723062 - GC11M027692



4227676440 27743605 - BDNF
Exon structure
Hs.502182 627 ENSG00000176697 brain-derived neurotrophic factor
4327680021 27742225 - GC11M027691



4427717858 27899195 - GC11M027718



4527717859 27899195 - ENSG00000255496
Exon structure


ENSG00000255496
4627827864 27830105 + CBX3P1
Exon structure

159770 ENSG00000177447 chromobox homolog 3 pseudogene 1
4727848708 27849014 + GC11P027850



4827864865 27865138 + GC11P027869



4927864865 27865138 + GC11P027870



5027909718 27912639 - HSP90AA2
Exon structure
Hs.523560 3324 ENSG00000224411 heat shock protein 90kDa alpha (cytosolic), class A member 2
5127911647 27912921 + GC11P027913



5227911647 27912921 - GC11M027914



5328000216 28041122 - ENSG00000255094
Exon structure


ENSG00000255094
5428031361 28031519 + GC11P028033



5528078361 28078457 + GC11P028079



5628078362 28078457 + MIR610
Exon structure

693195 ENSG00000207874 microRNA 610
5728042163 28129855 - KIF18A
Exon structure
Hs.301052 81930 ENSG00000121621 kinesin family member 18A
5828151483 28151690 - GC11M028155



5928151483 28151690 - GC11M028156



6028166450 28166752 - ATP5LP8
Exon structure

100462862 ENSG00000271332 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit g, pseudogene 8
6128179130 28179157 + PIR52110
Exon structure




6228202411 28202616 - GC11M028208



6328129795 28355054 + METTL15
Exon structure
Hs.243326 196074 ENSG00000169519 methyltransferase like 15
6428282741 28283066 - RN7SKP158
Exon structure

hugo513 ENSG00000222385 RNA, 7SK small nuclear pseudogene 158
6528308743 28309190 - RPS15AP31
Exon structure

100271652 ENSG00000238149 ribosomal protein S15a pseudogene 31
6628316720 28316949 - GC11M028318



6728316815 28317147 + GC11P028320



6828373636 28373861 + GC11P028376



6928373654 28548588 + ENSG00000255322
Exon structure


ENSG00000255322
7028538379 28540888 + ENSG00000254606
Exon structure


ENSG00000254606
7128535560 28548491 + GC11P028536



7228604865 28604984 + GC11P028606



7328700730 28705016 + ENSG00000248990
Exon structure


ENSG00000248990
7428860961 28864563 - GC11M028862



7528724085 29059363 + GC11P028727



7628724162 29085368 + ENSG00000249867
Exon structure


ENSG00000249867
7728942287 29024529 - GC11M028944



7829008182 29009045 + OR2BH1P
Exon structure

403238
olfactory receptor, family 2, subfamily BH, member 1 pseudogene
7929103585 29180505 - GC11M029105



8029181503 29288281 + ENSG00000254526
Exon structure


ENSG00000254526
8129297202 29298132 + LOC401677
Exon structure

401677 ENSG00000255450
8229298236 29298352 + ENSG00000211499
Exon structure


ENSG00000211499
8329413072 29415393 + LOC100421558
Exon structure

100421558 ENSG00000255281
8429467034 29478940 + ENSG00000255227
Exon structure


ENSG00000255227
8529357425 29615842 - ENSG00000254530
Exon structure


ENSG00000254530
8629540623 29574186 + ENSG00000255029
Exon structure


ENSG00000255029
8729616465 29652211 + ENSG00000255117
Exon structure


ENSG00000255117
8829640351 29644479 + GC11P029641



8929690433 29691175 - HNRNPRP2
Exon structure

100421354 ENSG00000255047 heterogeneous nuclear ribonucleoprotein R pseudogene 2
9029742946 29743238 - RN7SL240P
Exon structure

hugo893 ENSG00000243505 RNA, 7SL, cytoplasmic 240, pseudogene
9129735456 29903261 + ENSG00000254734
Exon structure


ENSG00000254734