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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 10

   GeneLoc map region (48,817,141 - 52,901,925 bp) around gene/marker "CHAT"

   Explanation:
   CHAT is located at 50,817,141-50,901,925 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
148736874 48827966 - PTPN20B
Exon structure
Hs.499552 26095 ENSG00000183675 protein tyrosine phosphatase, non-receptor type 20B
248737040 48827934 - GC10M048739



348844036 48868504 - FRMPD2P1
Exon structure

728798 ENSG00000197704 FERM and PDZ domain containing 2 pseudogene 1
448865533 48868504 - LOC100420617
Exon structure

100420617

548887454 48887481 + PIR60043
Exon structure




648902198 48902228 + GC10P048902



748903537 48922780 - CTGLF9P
Exon structure

728005
centaurin, gamma-like family, member 9 pseudogene
848901102 48952629 - BMS1P5
Exon structure
Hs.743373 399761 ENSG00000204164 BMS1 pseudogene 5
948931789 48931904 + ENSG00000222406
Exon structure


ENSG00000222406
1048935923 48935953 - GC10M048935



1148963054 48966661 + DUSP8P1
Exon structure

728813 ENSG00000213686 dual specificity phosphatase 8 pseudogene 1
1248952491 48980269 + GLUD1P2
Exon structure

100381203 ENSG00000227781 glutamate dehydrogenase 1 pseudogene 2
1348980162 48981273 - CTSLP3
Exon structure

644021 ENSG00000228418 cathepsin L pseudogene 3
1448988121 48998766 - ENSG00000232426
Exon structure


ENSG00000232426
1548987596 49018413 - GC10M048989



1649039156 49039183 + PIR33140
Exon structure




1748927413 49248867 - GC10M048933



1849090136 49090419 - RN7SL527P
Exon structure

hugo1312 ENSG00000266197 RNA, 7SL, cytoplasmic 527, pseudogene
1949087398 49094515 + FAM35EP
Exon structure

338598 ENSG00000230210 family with sequence similarity 35, member E, pseudogene
2049094789 49094823 - GC10M049094



2149196355 49196381 + PIR46985
Exon structure




2249195626 49205776 - GC10M049196



2349199649 49207825 - FAM25C
Exon structure
Hs.645212 644054 ENSG00000188279 family with sequence similarity 25, member C
2449218956 49218983 - GC10M049219



2549218978 49219008 + PIR49332
Exon structure




2649217898 49239743 - CTGLF12P
Exon structure

414224 ENSG00000179296 centaurin, gamma-like family, member 12 pseudogene
2749248476 49248591 + ENSG00000252149
Exon structure


ENSG00000252149
2849250363 49250394 - GC10M049250



2949252633 49252663 - GC10M049252



3049256241 49268060 - BMS1P7
Exon structure

100133265 ENSG00000243899 BMS1 pseudogene 7
3149272334 49348465 - PTPN20CP
Exon structure

653045 ENSG00000126542 protein tyrosine phosphatase, non-receptor type 20C, pseudogene
3249320060 49320077 + GC10P049320



3349363368 49364177 - ENSG00000232462
Exon structure


ENSG00000232462
3449382938 49384388 - GC10M049382



3549364601 49482941 - FRMPD2
Exon structure
Hs.664786 143162 ENSG00000170324 FERM and PDZ domain containing 2
3649455216 49456389 + GC10P049455



3749456586 49459654 - GC10M049456



3849500742 49501460 + RPS6P14
Exon structure

100131396 ENSG00000225482 ribosomal protein S6 pseudogene 14
3949514698 49647403 + MAPK8
Exon structure
Hs.138211 5599 ENSG00000107643 mitogen-activated protein kinase 8
4049633232 49644483 + GC10P049633



4149644973 49647400 + GC10P049648



4249649950 49652001 + GC10P049652



4349651879 49653859 - GC10M049655



4449717904 49719721 - GC10M049722



4549718568 49719632 - ARHGAP22-IT1
Exon structure
Hs.667964 100689073 ENSG00000248682 ARHGAP22 intronic transcript 1 (non-protein coding)
4649661344 49813133 - GC10M049661



4749754517 49754758 - ENSG00000231906
Exon structure


ENSG00000231906
4849654077 49864310 - ARHGAP22
Exon structure
Hs.655672 58504 ENSG00000128805 Rho GTPase activating protein 22
4949832049 49833138 - ENSG00000251413
Exon structure


ENSG00000251413
5049872244 49880469 - ENSG00000236800
Exon structure


ENSG00000236800
5149953247 49960153 - RPL13AP19
Exon structure

100132924 ENSG00000228754 ribosomal protein L13a pseudogene 19
5249892921 50191001 + WDFY4
Exon structure
Hs.287379 57705 ENSG00000128815 WDFY family member 4
5350042957 50044714 - GC10M050043



5450086067 50086694 + ENSG00000228403
Exon structure


ENSG00000228403
5550092000 50143258 - ENSG00000241577
Exon structure


ENSG00000241577
5650117528 50143242 - LRRC18
Exon structure
Hs.202438 474354 ENSG00000165383 leucine rich repeat containing 18
5750184597 50188447 - GC10M050185



5850186390 50191001 + GC10P050186



5950184599 50201091 - ENSG00000233665
Exon structure


ENSG00000233665
6050193557 50193632 - MIR4294
Exon structure

100422895 ENSG00000264800 microRNA 4294
6150192609 50226942 + ENSG00000226576
Exon structure


ENSG00000226576
6250222412 50224993 - GC10M050227



6350230849 50231095 + GC10P050235



6450257216 50257245 - PIR36323
Exon structure




6550222290 50323559 - VSTM4
Exon structure
Hs.522928 196740 ENSG00000165633 V-set and transmembrane domain containing 4
6650272196 50285336 - GC10M050272



6750301113 50301145 - GC10M050301



6850339199 50342065 - FAM170B
Exon structure
Hs.646291 170370 ENSG00000172538 family with sequence similarity 170, member B
6950329884 50359592 + FAM170B-AS1
Exon structure
Hs.404175 100506733 ENSG00000234736 FAM170B antisense RNA 1
7050363614 50375038 - GC10M050363



7150362773 50396630 - C10orf128
Exon structure
Hs.385493 170371 ENSG00000204161 chromosome 10 open reading frame 128
7250502784 50507013 - GC10M050502



7350504157 50507063 - C10orf71-AS1
Exon structure
Hs.562293 100506769 ENSG00000236208 C10orf71 antisense RNA 1
7450507319 50524292 + GC10P050508



7550507187 50535537 + C10orf71
Exon structure
Hs.585480 118461 ENSG00000177354 chromosome 10 open reading frame 71
7650572237 50603497 - DRGX
Exon structure
Hs.534530 644168 ENSG00000165606 dorsal root ganglia homeobox
7750604162 50604266 + GC10P050607



7850639184 50639919 + GC10P050639



7950647349 50647378 - PIR35455
Exon structure




8050641879 50655452 - GC10M050641



8150648862 50649002 + HSPD1P17
Exon structure

100462986
heat shock 60kDa protein 1 (chaperonin) pseudogene 17
8250627323 50680949 + ENSG00000235939
Exon structure


ENSG00000235939
8350691414 50714045 - GC10M050691



8450704627 50704658 - GC10M050704



8550663414 50747584 - ERCC6
Exon structure
Hs.49063 2074 ENSG00000225830 excision repair cross-complementation group 6
8650726991 50729600 - GC10M050729



8750731945 50731974 - PIR54050
Exon structure




8850723151 50747086 - PGBD3
Exon structure

267004 ENSG00000243251 piggyBac transposable element derived 3
8950723247 50747584 - ERCC6-PGBD3
Exon structure

101243544 ENSG00000258838 ERCC6-PGBD3 readthrough
9050732982 50738783 - GC10M050732



9150749152 50749182 + PIR37309
Exon structure




9250749152 50749182 + GC10P050752



9350759354 50760698 + ENSG00000271237
Exon structure


ENSG00000271237
9450818347 50820766 + SLC18A3
Exon structure
Hs.654374 6572 ENSG00000187714 solute carrier family 18 (vesicular acetylcholine transporter), member 3
9550817140 50827841 + GC10P050830



9650817142 50830212 + GC10P050831



9750821153 50830196 + GC10P050829



9850817141 50901925 + CHAT
Exon structure
Hs.302002 1103 ENSG00000070748 choline O-acetyltransferase
9950887684 50918307 + C10orf53
Exon structure
Hs.131287 282966 ENSG00000178645 chromosome 10 open reading frame 53
10050942687 50970425 - OGDHL
Exon structure
Hs.17860 55753 ENSG00000197444 oxoglutarate dehydrogenase-like
10150980317 50980586 + GC10P050981



10250979109 50982464 + MAPK6PS6
Exon structure

282967 ENSG00000226389 mitogen-activated protein kinase 6 pseudogene 6
10351023104 51023644 + RPL21P89
Exon structure

100271422 ENSG00000229870 ribosomal protein L21 pseudogene 89
10451023142 51023608 + GC10P051025



10551040849 51041320 - GC10M051040



10651073367 51075480 - GC10M051073



10751117591 51118033 + RPL35AP24
Exon structure

100271631 ENSG00000230166 ribosomal protein L35a pseudogene 24
10851117659 51117988 + GC10P051119



10951132498 51132524 + PIR55648
Exon structure




11051187938 51192032 + FAM21D
Exon structure

653450 ENSG00000174196 family with sequence similarity 21, member D
11151026325 51371331 - PARG
Exon structure
Hs.535298; Hs.732225 8505 ENSG00000227345 poly (ADP-ribose) glycohydrolase
11251211725 51212022 - ENSG00000270568
Exon structure


ENSG00000270568
11351214507 51216406 - FAM25D
Exon structure

728955 ENSG00000214986 family with sequence similarity 25, member D
11451225773 51225803 + PIR49331
Exon structure




11551227131 51230849 - GC10M051227



11651240583 51243565 - GC10M051240



11751255380 51255495 + RNA5SP316
Exon structure

hugo1748 ENSG00000222100 RNA, 5S ribosomal pseudogene 316
11851253787 51262426 - ENSG00000272225
Exon structure


ENSG00000272225
11951264112 51264148 - GC10M051265



12051264987 51265015 - GC10M051264



12151265357 51265389 + GC10P051265



12251224681 51371321 - AGAP8
Exon structure
Hs.536192 728404 ENSG00000174194 ArfGAP with GTPase domain, ankyrin repeat and PH domain 8
12351253146 51371338 - ENSG00000244393
Exon structure


ENSG00000244393
12451253908 51371316 - LOC728407
Exon structure

728407

12551287081 51371070 - ENSG00000225784
Exon structure


ENSG00000225784
12651339370 51339837 + RPL35AP25
Exon structure

100271633 ENSG00000236787 ribosomal protein L35a pseudogene 25
12751339438 51339770 + GC10P051341



12851350551 51350746 + GC10P051353



12951381794 51381823 + PIR62671
Exon structure




13051383526 51383726 + ENSG00000223182
Exon structure


ENSG00000223182
13151465247 51465277 + PIR49334
Exon structure




13251465248 51465277 + GC10P051469



13351467691 51467722 - PIR31732
Exon structure




13451467691 51467722 - GC10M051469



13551464162 51486327 - AGAP7
Exon structure
Hs.528346 653268 ENSG00000204169 ArfGAP with GTPase domain, ankyrin repeat and PH domain 7
13651490933 51490961 + PIR31308
Exon structure




13751493485 51493516 + PIR51454
Exon structure




13851493485 51493516 + GC10P051495



13951532102 51532572 - RPL23AP61
Exon structure

728484 ENSG00000228326 ribosomal protein L23a pseudogene 61
14051535126 51535474 + ENSG00000230553
Exon structure


ENSG00000230553
14151549498 51562517 + MSMB
Exon structure
Hs.255462 4477 ENSG00000138294 microseminoprotein, beta-
14251549553 51562493 + GC10P051550



14351565108 51590734 + NCOA4
Exon structure
Hs.643658; Hs.709644 8031 ENSG00000138293 nuclear receptor coactivator 4
14451584948 51584979 + GC10P051599



14551584948 51584979 + PIR52076
Exon structure




14651585522 51585551 + PIR45496
Exon structure




14751585310 51586347 + GC10P051600



14851585312 51586347 + GC10P051601



14951586720 51586747 - PIR39541
Exon structure




15051588591 51588620 - PIR62584
Exon structure




15151589227 51589254 + PIR40177
Exon structure




15251590070 51590100 + PIR60783
Exon structure




15351590070 51590100 + GC10P051598



15451592089 51592263 - PIR61640
Exon structure




15551592089 51592263 - GC10M051599



15651592089 51594455 - GC10M051598



15751595123 51595153 - PIR61931
Exon structure




15851595123 51595153 - GC10M051597



15951592080 51623365 - TIMM23
Exon structure
Hs.524308; Hs.499594 100287932 ENSG00000138297 translocase of inner mitochondrial membrane 23 homolog (yeast)
16051611024 51611224 - ENSG00000223111
Exon structure


ENSG00000223111
16151643992 51644187 - GC10M051643



16251654908 51655375 - RPL35AP23
Exon structure

100271629 ENSG00000229464 ribosomal protein L35a pseudogene 23
16351654977 51655307 - GC10M051656



16451623413 51732824 + PARGP1
Exon structure

100506785 ENSG00000214982 poly (ADP-ribose) glycohydrolase pseudogene 1
16551723005 51724217 + GC10P051726



16651729604 51729636 - GC10M051729



16751729979 51730007 + GC10P051730



16851730805 51730841 + GC10P051733



16951729786 51734610 + TIMM23B
Exon structure

100652748 ENSG00000204152 translocase of inner mitochondrial membrane 23 homolog B (yeast)
17051732523 51741813 + LINC00843
Exon structure

102902672 ENSG00000178440 long intergenic non-protein coding RNA 843
17151738369 51738396 + PIR46129
Exon structure




17251739425 51739540 - RNA5SP317
Exon structure

hugo1749 ENSG00000222108 RNA, 5S ribosomal pseudogene 317
17351750710 51750736 + PIR44052
Exon structure




17451748078 51770259 + AGAP6
Exon structure
Hs.536158 414189 ENSG00000204149 ArfGAP with GTPase domain, ankyrin repeat and PH domain 6
17551769132 51769162 - GC10M051769



17651769157 51769184 + PIR58372
Exon structure




17751769364 51769391 + PIR56532
Exon structure




17851784895 51787123 - SLC9A3P3
Exon structure

728990 ENSG00000226631 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 pseudogene 3
17951803465 51804531 + GC10P051803



18051780942 51827563 - FLJ31813
Exon structure
Hs.712902 326332 ENSG00000235618 FAM21B pseudogene (est)
18151807102 51807132 + PIR32938
Exon structure




18251807102 51807132 + GC10P051809



18351816538 51819040 - FAM21EP
Exon structure

100421577
family with sequence similarity 21, member E, pseudogene
18451853158 51853378 - GC10M051853



18551827648 51893269 + FAM21A
Exon structure
Hs.645272 387680 ENSG00000099290 family with sequence similarity 21, member A
18651910338 51912326 + SLC9A3P1
Exon structure

6551 ENSG00000233011 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 pseudogene 1
18751946971 51958906 - GC10M051946



18851942538 52008370 - ASAH2
Exon structure
Hs.512645 56624 ENSG00000188611 N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
18952024724 52026772 + DYNC1I2P1
Exon structure

728532 ENSG00000225137 dynein, cytoplasmic 1, intermediate chain 2 pseudogene 1
19052094298 52095876 + ENSG00000269165
Exon structure


ENSG00000269165
19152102202 52102561 - GC10M052102



19252103896 52178238 - GC10M052103



19352152766 52154321 + ENSG00000269700
Exon structure


ENSG00000269700
19452065345 52384923 - SGMS1
Exon structure
Hs.654698 259230 ENSG00000198964 sphingomyelin synthase 1
19552071046 52383612 - GC10M052077



19652071048 52383612 - GC10M052078



19752232574 52234006 + ENSG00000225303
Exon structure


ENSG00000225303
19852345310 52345463 - RMRPP4
Exon structure

hugo556 ENSG00000251950 RNA component of mitochondrial RNA processing endoribonuclease pseudogene 4
19952348409 52349592 - GC10M052349



20052350411 52350461 - GC10M052354



20152350412 52350472 - RNU7-107P
Exon structure

hugo3395 ENSG00000238523 RNA, U7 small nuclear 107 pseudogene
20252365750 52365953 - ENSG00000230036
Exon structure


ENSG00000230036
20352383739 52386623 + GC10P052383



20452386783 52391396 + GC10P052386



20552389446 52389476 + GC10P052389



20652389287 52391008 - SHQ1P1
Exon structure

644451 ENSG00000231588 SHQ1, H/ACA ribonucleoprotein assembly factor pseudogene 1
20752384711 52401211 + ENSG00000226200
Exon structure


ENSG00000226200
20852419603 52419629 - PIR41880
Exon structure




20952415727 52423706 + BEND3P1
Exon structure

644459 ENSG00000231345 BEN domain containing 3 pseudogene 1
21052421221 52421248 - PIR61306
Exon structure




21152423299 52423328 + PIR48277
Exon structure




21252423313 52423341 - PIR39256
Exon structure




21352427143 52427171 - PIR55021
Exon structure




21452426409 52434709 - GC10M052426



21552437635 52437662 - PIR60118
Exon structure




21652438779 52438811 - GC10M052438



21752440152 52440178 - PIR42111
Exon structure




21852440979 52441005 - PIR41070
Exon structure




21952441274 52441300 - PIR34581
Exon structure




22052436503 52446086 + NUTM2HP
Exon structure

729023 ENSG00000232706 NUT family member 2H, pseudogene
22152442159 52442186 - PIR57682
Exon structure




22252443467 52443500 - GC10M052454



22352443999 52444027 - PIR59248
Exon structure




22452445152 52445182 - PIR48750
Exon structure




22552445657 52445684 + PIR46101
Exon structure




22652445796 52445823 + PIR54706
Exon structure




22752448338 52448365 + PIR49394
Exon structure




22852454774 52455762 + LOC100421009
Exon structure

100421009 ENSG00000226168
22952455352 52455741 + GC10P052461



23052456027 52456909 + NPAP1P1
Exon structure

100420827
nuclear pore associated protein 1 pseudogene 1
23152456527 52456556 + PIR58238
Exon structure




23252464418 52468675 - CTSLP4
Exon structure

644496 ENSG00000230011 cathepsin L pseudogene 4
23352486705 52487729 - PGGT1BP1
Exon structure

653895 ENSG00000213667 protein geranylgeranyltransferase type I, beta subunit pseudogene 1
23452497327 52499508 - GC10M052501



23552499078 52576255 + ASAH2B
Exon structure
Hs.710005 653308 ENSG00000204147 N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B
23652559793 52565728 - GC10M052562



23752582452 52584285 - ENSG00000229711
Exon structure


ENSG00000229711
23852559169 52645435 - A1CF
Exon structure
Hs.282795 29974 ENSG00000148584 APOBEC1 complementation factor
23952722753 52723118 - GC10M052726



24052722710 52723187 - CCDC58P2
Exon structure

100287708 ENSG00000236944 coiled-coil domain containing 58 pseudogene 2
24152724030 52724980 + ENSG00000261368
Exon structure


ENSG00000261368
24252750729 52751481 - GC10M052750



24352822339 52828313 - ENSG00000223502
Exon structure


ENSG00000223502
24452750945 54058110 + PRKG1
Exon structure
Hs.407535 5592 ENSG00000185532 protein kinase, cGMP-dependent, type I