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  Chromosome 10

   GeneLoc map region (44,549,955 - 48,641,045 bp) around gene/marker "PTPN20A"

   Explanation:
   PTPN20A is located at 46,549,955-46,641,045 bp

    [ GeneLoc Home Page ]


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Start
(bp)
End
(bp)
Strand
Gene
Unigene cluster
Entrez Gene Id
Ensembl Id
Description
144740522 44755367 + GC10P044742



244755050 44757261 - ENSG00000237590
Exon structure


ENSG00000237590
344787706 44789157 - ENSG00000229116
Exon structure


ENSG00000229116
444788204 44790179 + LOC100130539
Exon structure
Hs.694626 100130539
Uncharacterized LOC100130539 (est)
544793038 44881941 - CXCL12
Exon structure
Hs.522891 6387 ENSG00000107562 chemokine (C-X-C motif) ligand 12
644869462 44869488 - PIR52448
Exon structure




744872332 44872548 - GC10M044875



844873687 44878739 + ENSG00000269515
Exon structure


ENSG00000269515
944909863 44910650 - RPL9P21
Exon structure

728374 ENSG00000214089 ribosomal protein L9 pseudogene 21
1044983783 44983893 - ENSG00000270767
Exon structure


ENSG00000270767
1145073474 45086387 + GC10P045077



1245086656 45097552 - ENSG00000234580
Exon structure


ENSG00000234580
1345301891 45303671 + EIF2AP4
Exon structure

100874401 ENSG00000227395 eukaryotic translation initiation factor 2A pseudogene 4
1445306471 45455137 - GC10M045309



1545306472 45455137 - TMEM72-AS1
Exon structure
Hs.568801 220980 ENSG00000224812 TMEM72 antisense RNA 1
1645395062 45415668 - ENSG00000234504
Exon structure


ENSG00000234504
1745406648 45432450 + TMEM72
Exon structure
Hs.292788 643236 ENSG00000187783 transmembrane protein 72
1845432956 45451173 + ENSG00000223462
Exon structure


ENSG00000223462
1945432955 45451176 + GC10P045433



2045466429 45474330 - C10orf10
Exon structure
Hs.93675 11067 ENSG00000165507 chromosome 10 open reading frame 10
2145454855 45490172 + RASSF4
Exon structure
Hs.522895 83937 ENSG00000107551 Ras association (RalGDS/AF-6) domain family member 4
2245473425 45473453 - PIR49011
Exon structure




2345493993 45494019 - PIR39907
Exon structure




2445494145 45494175 - PIR53874
Exon structure




2545493146 45496470 - C10orf25
Exon structure
Hs.707791 220979 ENSG00000165511 chromosome 10 open reading frame 25
2645494826 45494853 - PIR48571
Exon structure




2745495080 45495107 - PIR53385
Exon structure




2845495923 45500777 + ZNF22
Exon structure
Hs.655124; Hs.462693 7570 ENSG00000165512 zinc finger protein 22
2945551062 45552674 + DUXAP4
Exon structure

503633 ENSG00000270258 double homeobox A pseudogene 4
3045568594 45568989 - ENSG00000228462
Exon structure


ENSG00000228462
3145568537 45571354 - RPS19P7
Exon structure

728509
ribosomal protein S19 pseudogene 7
3245497670 45642669 - CEP164P1
Exon structure

100289237 ENSG00000226937 centrosomal protein 164kDa pseudogene 1
3345571369 45572131 - GC10M045573



3445594924 45650044 - RSU1P2
Exon structure
Hs.434365 100133308 ENSG00000232554 Ras suppressor protein 1 pseudogene 2
3545622762 45644363 + CUBNP3
Exon structure

100421634 ENSG00000235690 cubilin (intrinsic factor-cobalamin receptor) pseudogene 3
3645646888 45647613 - ANKRD54P1
Exon structure

100419962 ENSG00000236442 ankyrin repeat domain 54 pseudogene 1
3745642842 45666837 + ENSG00000243349
Exon structure


ENSG00000243349
3845659462 45659536 + MIR3156-1
Exon structure

100422988 ENSG00000263476 microRNA 3156-1
3945650110 45681489 + ANKRD30BP3
Exon structure
Hs.666134 338579 ENSG00000230501 ankyrin repeat domain 30B pseudogene 3
4045659676 45676875 - ENSG00000227683
Exon structure


ENSG00000227683
4145684238 45684344 - RNU6-1207P
Exon structure

hugo2182 ENSG00000207071 RNA, U6 small nuclear 1207, pseudogene
4245684237 45684344 - GC10M045687



4345727466 45742809 - CUBNP2
Exon structure

100289280 ENSG00000234993 cubilin (intrinsic factor-cobalamin receptor) pseudogene 2
4445753756 45754568 + OR6D1P
Exon structure

220974 ENSG00000224402 olfactory receptor, family 6, subfamily D, member 1 pseudogene
4545754526 45754552 - PIR41722
Exon structure




4645798887 45799813 - OR13A1
Exon structure
Hs.532435 79290 ENSG00000256574 olfactory receptor, family 13, subfamily A, member 1
4745905150 45905177 - PIR47812
Exon structure




4845869629 45941565 + ALOX5
Exon structure
Hs.89499 240 ENSG00000012779 arachidonate 5-lipoxygenase
4945931683 45934607 + GC10P045933



5045940018 45948569 - ENSG00000231964
Exon structure


ENSG00000231964
5145950378 45950406 - PIR39660
Exon structure




5245950065 45952578 - GC10M045983



5345951911 45951942 - PIR60487
Exon structure




5445951925 45951955 - PIR58666
Exon structure




5545952198 45952229 - PIR57048
Exon structure




5645952605 45952636 - GC10M045978



5745952605 45952636 - PIR49337
Exon structure




5845950035 46090354 - MARCH8
Exon structure
Hs.499489 220972 ENSG00000165406 membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase
5946111039 46168251 - ZFAND4
Exon structure
Hs.89029 93550 ENSG00000172671 zinc finger, AN1-type domain 4
6046174314 46174341 + PIR56004
Exon structure




6146174140 46195981 + CTGLF10P
Exon structure

653234 ENSG00000230869 centaurin, gamma-like family, member 10 pseudogene
6246189099 46189126 + PIR61172
Exon structure




6346191237 46191264 + PIR50835
Exon structure




6446194283 46194310 + PIR43402
Exon structure




6546197292 46197321 + PIR33317
Exon structure




6646197292 46221486 - FAM21FP
Exon structure

100288690 ENSG00000237840 family with sequence similarity 21, member F, pseudogene
6746214872 46214899 + PIR42015
Exon structure




6846221142 46221486 - ENSG00000228702
Exon structure


ENSG00000228702
6946218375 46229027 - GC10M046220



7046248166 46248381 - GC10M046253



7146248166 46248386 - GC10M046252



7246252734 46252760 + PIR32972
Exon structure




7346222648 46288412 + FAM21C
Exon structure
Hs.365286 253725 ENSG00000172661 family with sequence similarity 21, member C
7446308096 46308392 - ENSG00000270434
Exon structure


ENSG00000270434
7546310876 46313036 - FAM25E
Exon structure

643479 ENSG00000231122 family with sequence similarity 25, member E
7646321042 46349323 - AGAP4
Exon structure
Hs.656384 119016 ENSG00000188234 ArfGAP with GTPase domain, ankyrin repeat and PH domain 4
7746342733 46342761 + PIR47123
Exon structure




7846351755 46351870 + RNA5SP310
Exon structure

hugo1634 ENSG00000239152 RNA, 5S ribosomal pseudogene 310
7946355273 46355301 + PIR53888
Exon structure




8046371558 46373614 + GC10P046373



8146349541 46411619 - ENSG00000239883
Exon structure


ENSG00000239883
8246516459 46519722 - GC10M046518



8346571868 46571895 - PIR60586
Exon structure




8446549955 46641045 - PTPN20A
Exon structure
Hs.440733 653129 ENSG00000204179 protein tyrosine phosphatase, non-receptor type 20A
8546646995 46647022 + PIR48133
Exon structure




8646657135 46681604 - FRMPD2P2
Exon structure

728603 ENSG00000150175 FERM and PDZ domain containing 2 pseudogene 2
8746699197 46709839 - GC10M046702



8846717127 46733199 - CTGLF8P
Exon structure

728608 ENSG00000243289 centaurin, gamma-like family, member 8 pseudogene
8946742028 46742143 + RNA5SP311
Exon structure

hugo1635 ENSG00000238405 RNA, 5S ribosomal pseudogene 311
9046745836 46745863 + PIR50250
Exon structure




9146737612 46762892 - BMS1P1
Exon structure
Hs.571994 728053 ENSG00000204177 BMS1 pseudogene 1
9246763720 46763749 + PIR36345
Exon structure




9346763720 46763749 + GC10P046766



9446762813 46777198 + GC10P046767



9546773447 46775208 + DUSP8P3
Exon structure

441554 ENSG00000215097 dual specificity phosphatase 8 pseudogene 3
9646772794 46778894 + GLUD1P7
Exon structure
Hs.741415 414212 ENSG00000227194 glutamate dehydrogenase 1 pseudogene 7
9746775417 46791522 - CTSLP5
Exon structure

643587 ENSG00000228745 cathepsin L pseudogene 5
9846797868 46809021 - ENSG00000230761
Exon structure


ENSG00000230761
9946900386 46900669 - RN7SL248P
Exon structure

hugo901 ENSG00000264977 RNA, 7SL, cytoplasmic 248, pseudogene
10046904715 46904749 - GC10M046906



10146913771 46915114 + RHEBP1
Exon structure

6008 ENSG00000229927 Ras-homolog enriched in brain pseudogene 1
10246914145 46917230 - ENSG00000272430
Exon structure


ENSG00000272430
10346897592 46939145 + FAM35BP
Exon structure
Hs.594331 414241 ENSG00000165874 family with sequence similarity 35, member B, pseudogene
10446934901 46934927 + PIR45604
Exon structure




10546937463 46951699 - ENSG00000229227
Exon structure


ENSG00000229227
10646951472 46966835 + ENSG00000231187
Exon structure


ENSG00000231187
10746955444 46971400 - SYT15
Exon structure
Hs.696346 83849 ENSG00000204176 synaptotagmin XV
10846963843 46963869 - PIR41118
Exon structure




10946976662 46976690 + PIR34546
Exon structure




11046993546 47005643 + GPRIN2
Exon structure
Hs.523375 9721 ENSG00000204175 G protein regulated inducer of neurite outgrowth 2
11147002012 47002038 + PIR32632
Exon structure




11247002947 47002976 - PIR46914
Exon structure




11347004740 47004769 + PIR35138
Exon structure




11447006339 47006366 - PIR31182
Exon structure




11547032333 47037609 + GC10P047034



11647051925 47052306 + GC10P047053



11747073238 47073267 + PIR56474
Exon structure




11847081469 47081496 - PIR43306
Exon structure




11947083534 47088320 + NPY4R
Exon structure
Hs.524719 5540 ENSG00000204174 neuropeptide Y receptor Y4
12047011753 47174018 - LINC00842
Exon structure
Hs.744313 643650 ENSG00000223477 long intergenic non-protein coding RNA 842
12147096360 47151400 - GC10M047100



12247133295 47133898 - HNRNPA1P33
Exon structure
Hs.711067 728643 ENSG00000213412 heterogeneous nuclear ribonucleoprotein A1 pseudogene 33
12347128239 47171449 + GC10P047134



12447152345 47152374 + PIR31302
Exon structure




12547154567 47154593 + PIR62289
Exon structure




12647155735 47155761 + PIR60444
Exon structure




12747157983 47174093 - ANXA8L1
Exon structure
Hs.744068 728113 ENSG00000150165 annexin A8-like 1
12847174442 47174739 - ENSG00000270369
Exon structure


ENSG00000270369
12947177204 47181688 - FAM25B
Exon structure

100132929 ENSG00000189090 family with sequence similarity 25, member B
13047177234 47181764 + GC10P047182



13147186203 47192185 + ENSG00000224919
Exon structure


ENSG00000224919
13247190590 47239738 - AGAP10
Exon structure

728127 ENSG00000204172 ArfGAP with GTPase domain, ankyrin repeat and PH domain 10
13347222341 47222456 + RNA5SP312
Exon structure

hugo1636 ENSG00000252877 RNA, 5S ribosomal pseudogene 312
13447207805 47243502 - ENSG00000254929
Exon structure


ENSG00000254929
13547228366 47241942 - BMS1P2
Exon structure
Hs.711898 414216 ENSG00000251079 BMS1 pseudogene 2
13647248344 47248741 + LOC2748
Exon structure

2748

13747254247 47256008 + DUSP8P4
Exon structure

728657 ENSG00000215065 dual specificity phosphatase 8 pseudogene 4
13847253595 47259683 + GLUD1P8
Exon structure

414213 ENSG00000232567 glutamate dehydrogenase 1 pseudogene 8
13947270681 47273487 - CTSLP7
Exon structure

100133189 ENSG00000232438 cathepsin L pseudogene 7
14047279073 47289833 - ENSG00000227310
Exon structure


ENSG00000227310
14147382464 47382747 - RN7SL453P
Exon structure

hugo1123 ENSG00000264710 RNA, 7SL, cytoplasmic 453, pseudogene
14247395842 47397188 - LOC642862
Exon structure

642862

14347396223 47396822 + RHEBP2
Exon structure

101060032 ENSG00000226964 Ras-homolog enriched in brain pseudogene 2
14447379720 47421238 + FAM35DP
Exon structure

439965 ENSG00000189014 family with sequence similarity 35, member D, pseudogene
14547570513 47573872 - ENSG00000226667
Exon structure


ENSG00000226667
14647571664 47575852 + GC10P047573



14747594379 47595653 + AHCYP1
Exon structure

340844 ENSG00000215044 adenosylhomocysteinase pseudogene 1
14847589840 47637966 - GC10M047590



14947619865 47619891 + PIR53286
Exon structure




15047605211 47644793 - ANTXRLP1
Exon structure

100996567 ENSG00000243536 anthrax toxin receptor-like pseudogene 1
15147656084 47657233 + ENSG00000259942
Exon structure


ENSG00000259942
15247657581 47701446 + ANTXRL
Exon structure
Hs.538515 195977 ENSG00000198250 anthrax toxin receptor-like
15347704297 47704326 + PIR43906
Exon structure




15447708307 47730236 + CTGLF11P
Exon structure

653259 ENSG00000204150 centaurin, gamma-like family, member 11 pseudogene
15547728953 47728982 + PIR32837
Exon structure




15647729610 47729638 + PIR61356
Exon structure




15747735736 47735763 - PIR45682
Exon structure




15847740330 47744825 + FAM25HP
Exon structure

414155 ENSG00000239492 family with sequence similarity 25, member H pseudogene
15947742393 47747200 + ENSG00000244599
Exon structure


ENSG00000244599
16047754638 47754664 + PIR39442
Exon structure




16147746920 47763041 + ANXA8L2
Exon structure
Hs.705389 244 ENSG00000186807 annexin A8-like 2
16247757664 47757691 + PIR43930
Exon structure




16347773312 47773339 + PIR62124
Exon structure




16447894023 47949417 + FAM21B
Exon structure
Hs.449662 55747 ENSG00000152726 family with sequence similarity 21, member B
16547944793 47952203 - GC10M047946



16647965760 47967323 + SLC9A3P4
Exon structure

389963 ENSG00000237393 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 pseudogene 4
16748001603 48055018 - ASAH2C
Exon structure

653365 ENSG00000072444 N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2C
16848149036 48150184 + GC10P048150



16948155943 48158691 + CTSLP2
Exon structure
Hs.568350 1517 ENSG00000224036 cathepsin L pseudogene 2
17048169665 48175810 - GLUD1P6
Exon structure

414209 ENSG00000231209 glutamate dehydrogenase 1 pseudogene 6
17148173345 48175106 - DUSP8P2
Exon structure

728725 ENSG00000215024 dual specificity phosphatase 8 pseudogene 2
17248183938 48183966 + PIR62612
Exon structure




17348185855 48186663 + GC10P048195



17448185856 48186665 + BMS1P6
Exon structure
Hs.463017 642826 ENSG00000251070 BMS1 pseudogene 6
17548188956 48188983 + PIR34351
Exon structure




17648190019 48190047 + PIR53880
Exon structure




17748192241 48192267 + PIR43266
Exon structure




17848193041 48193068 + PIR50937
Exon structure




17948200876 48200902 + PIR32443
Exon structure




18048201680 48201706 + PIR35910
Exon structure




18148202829 48202859 + PIR46595
Exon structure




18248202829 48202859 + GC10P048210



18348203360 48203387 + PIR55672
Exon structure




18448205091 48205122 + GC10P048208



18548205091 48205122 + PIR58556
Exon structure




18648205223 48205252 + PIR44016
Exon structure




18748206895 48207010 - RNA5SP313
Exon structure

hugo1637 ENSG00000252754 RNA, 5S ribosomal pseudogene 313
18848189612 48237508 + AGAP9
Exon structure
Hs.742298; Hs.645346 642517 ENSG00000198035 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9
18948247662 48252143 + FAM25G
Exon structure

100133093 ENSG00000197910 family with sequence similarity 25, member G
19048254606 48254905 + ENSG00000271217
Exon structure


ENSG00000271217
19148249334 48262214 + ENSG00000270119
Exon structure


ENSG00000270119
19248255225 48279200 + ANXA8
Exon structure
Hs.535306 653145 ENSG00000165390 annexin A8
19348255279 48279199 + LOC100996760
Exon structure

100996760 ENSG00000215020
19448294791 48294817 + PIR39362
Exon structure




19548324788 48332197 - ENSG00000226044
Exon structure


ENSG00000226044
19648357926 48358600 + ENSG00000228865
Exon structure


ENSG00000228865
19748355024 48373866 + ZNF488
Exon structure
Hs.27788 118738 ENSG00000165388 zinc finger protein 488
19848381487 48390991 - RBP3
Exon structure
Hs.591928 5949 ENSG00000107618 retinol binding protein 3, interstitial
19948387524 48387622 + ENSG00000266000
Exon structure


ENSG00000266000
20048390847 48390999 - GC10M048396



20148390847 48390999 - GC10M048395



20248413092 48416853 - GDF2
Exon structure
Hs.279463 2658 ENSG00000128802 growth differentiation factor 2
20348425785 48439138 - GDF10
Exon structure
Hs.2171 2662 ENSG00000107623 growth differentiation factor 10
20448497448 48499077 - GC10M048499



20548577520 48593703 - GC10M048579