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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 1

   GeneLoc map region (115,452,679 - 119,532,980 bp) around gene/marker "PTGFRN"

   Explanation:
   PTGFRN is located at 117,452,679-117,532,980 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
1115397424 115537991 + SYCP1
Exon structure
Hs.112743 6847 ENSG00000198765 synaptonemal complex protein 1
2115452700 115487568 + GC01P115452



3115520178 115537975 + GC01P115520



4115555186 115555217 + GC01P115555



5115572415 115576941 + TSHB
Exon structure
Hs.406687 7252 ENSG00000134200 thyroid stimulating hormone, beta
6115593066 115601046 - GC01M115593



7115590632 115632121 - TSPAN2
Exon structure
Hs.310458 10100 ENSG00000134198 tetraspanin 2
8115642293 115645279 + ENSG00000233730
Exon structure


ENSG00000233730
9115724043 115765741 + GC01P115724



10115813553 115819102 - GC01M115814



11115828537 115880857 - NGF
Exon structure
Hs.2561 4803 ENSG00000134259 nerve growth factor (beta polypeptide)
12115825655 115910693 + ENSG00000228035
Exon structure


ENSG00000228035
13116014562 116018648 + ENSG00000226973
Exon structure


ENSG00000226973
14116028272 116028364 + ENSG00000265534
Exon structure


ENSG00000265534
15116066315 116066341 + PIR61717
Exon structure




16116099366 116100096 + TCEB1P20
Exon structure

100287778 ENSG00000229101 transcription elongation factor B (SIII), polypeptide 1 pseudogene 20
17116107003 116108053 + CNOT7P2
Exon structure

100132332 ENSG00000232185 CCR4-NOT transcription complex, subunit 7 pseudogene 2
18116119847 116120407 - LOC100287840
Exon structure

100287840 ENSG00000270631
19116137955 116137982 - PIR48206
Exon structure




20116149092 116149390 + RN7SL420P
Exon structure

hugo1197 ENSG00000239984 RNA, 7SL, cytoplasmic 420, pseudogene
21116164492 116164626 - GC01M116167



22116164493 116164626 - ENSG00000207502
Exon structure


ENSG00000207502
23116184574 116240845 + VANGL1
Exon structure
Hs.515130 81839 ENSG00000173218 VANGL planar cell polarity protein 1
24116269646 116275548 - GC01M116269



25116242624 116311426 - CASQ2
Exon structure
Hs.57975 845 ENSG00000118729 calsequestrin 2 (cardiac muscle)
26116370142 116370341 + GC01P116373



27116378998 116386538 - NHLH2
Exon structure
Hs.46296 4808 ENSG00000177551 nescient helix loop helix 2
28116380467 116386538 + GC01P116387



29116383626 116383862 + GC01P116386



30116399531 116400440 - HNRNPA1P43
Exon structure

400769 ENSG00000214204 heterogeneous nuclear ribonucleoprotein A1 pseudogene 43
31116459118 116459320 + ENSG00000271143
Exon structure


ENSG00000271143
32116463389 116466789 - GC01M116468



33116461997 116468529 + RP11-12L8.1
Exon structure

101928995 ENSG00000228127
34116473512 116474136 + GC01P116476



35116556434 116560326 - ENSG00000237993
Exon structure


ENSG00000237993
36116519119 116612675 + SLC22A15
Exon structure
Hs.125482 55356 ENSG00000163393 solute carrier family 22, member 15
37116575298 116580148 + GC01P116575



38116654376 116677861 + MAB21L3
Exon structure
Hs.376194 126868 ENSG00000173212 mab-21-like 3 (C. elegans)
39116706905 116708862 + ENSG00000235933
Exon structure


ENSG00000235933
40116783460 116784684 - GC01M116786



41116821227 116821442 + GC01P116825



42116821228 116821442 + ENSG00000221040
Exon structure


ENSG00000221040
43116831855 116837107 - GC01M116835



44116916755 116917283 - GC01M116919



45116915890 116926718 - ENSG00000269279
Exon structure


ENSG00000269279
46116915891 116928766 + GC01P116916



47116931259 116931325 + GC01P116944



48116931259 116931325 + GC01P116939



49116931523 116931619 + GC01P116945



50116915290 116952883 + ATP1A1
Exon structure
Hs.371889 476 ENSG00000163399 ATPase, Na+/K+ transporting, alpha 1 polypeptide
51116941266 116941296 + GC01P116943



52116941266 116941296 + PIR57503
Exon structure




53116943752 116944655 + GC01P116946



54116934869 116961244 - ATP1A1-AS1
Exon structure
Hs.664752 84852 ENSG00000203865 ATP1A1 antisense RNA 1
55116948731 116952883 + GC01P116951



56116956387 116956491 - GC01M116960



57116956388 116956491 - ENSG00000212385
Exon structure


ENSG00000212385
58116971671 116975990 - ENSG00000230381
Exon structure


ENSG00000230381
59116966346 117021464 - RP4-655J12.4
Exon structure

101929023 ENSG00000233154
60116995158 116995249 + ENSG00000200547
Exon structure


ENSG00000200547
61116995153 116995257 + GC01P116998



62116971671 117105789 - GC01M116973



63117035638 117041834 - LOC100506459
Exon structure
Hs.734297 100506459 ENSG00000224950 Uncharacterized LOC100506459 (est)
64117035671 117044680 + GC01P117035



65117061865 117087188 - GC01M117064



66117074378 117076733 - NAP1L4P1
Exon structure

728589 ENSG00000177173 nucleosome assembly protein 1-like 4 pseudogene 1
67117064504 117087188 - GC01M117065



68117057156 117113715 - CD58
Exon structure
Hs.34341 965 ENSG00000116815 CD58 molecule
69117098858 117099970 + GC01P117100



70117102646 117102733 - MIR548AC
Exon structure

100616384 ENSG00000264419 microRNA 548ac
71117134728 117134821 - ENSG00000238532
Exon structure


ENSG00000238532
72117117031 117210375 - IGSF3
Exon structure
Hs.171057 3321 ENSG00000143061 immunoglobulin superfamily, member 3
73117214371 117214449 + MIR320B1
Exon structure

100302117 ENSG00000211543 microRNA 320b-1
74117236734 117249225 + C1orf137
Exon structure

388667 ENSG00000203864 chromosome 1 open reading frame 137
75117256258 117257533 - GAPDHP64
Exon structure

391069 ENSG00000231072 glyceraldehyde-3-phosphate dehydrogenase pseudogene 64
76117282603 117285231 - NEFHP1
Exon structure

339396 ENSG00000223489 neurofilament, heavy polypeptide pseudogene 1
77117297007 117311851 + CD2
Exon structure
Hs.523500 914 ENSG00000116824 CD2 molecule
78117317700 117318245 - FTH1P22
Exon structure

100462772 ENSG00000225079 ferritin, heavy polypeptide 1 pseudogene 22
79117338494 117349012 - GC01M117341



80117386222 117386253 - GC01M117386



81117405040 117405070 - GC01M117405



82117447772 117447916 + ENSG00000221425
Exon structure


ENSG00000221425
83117451771 117452153 - ENSG00000272715
Exon structure


ENSG00000272715
84117452679 117532980 + PTGFRN
Exon structure
Hs.418093 5738 ENSG00000134247 prostaglandin F2 receptor inhibitor
85117497960 117497977 + GC01P117497



86117500919 117500945 + PIR48772
Exon structure




87117504969 117505093 - RNA5SP55
Exon structure

100873293 ENSG00000252510 RNA, 5S ribosomal pseudogene 55
88117529662 117532972 + GC01P117529



89117544382 117579167 + CD101
Exon structure
Hs.654598 9398 ENSG00000134256 CD101 molecule
90117575566 117579098 + GC01P117575



91117568104 117602112 - RP11-27K13.3
Exon structure

101929099 ENSG00000236137
92117593859 117593887 - PIR49222
Exon structure




93117602925 117650075 + TTF2
Exon structure
Hs.486818 8458 ENSG00000116830 transcription termination factor, RNA polymerase II
94117637265 117637350 + MIR942
Exon structure

100126331 ENSG00000215930 microRNA 942
95117635409 117644371 + GC01P117635



96117647169 117647504 + GC01P117648



97117653677 117665209 - TRIM45
Exon structure
Hs.301526 80263 ENSG00000134253 tripartite motif containing 45
98117660657 117660684 - PIR35685
Exon structure




99117680787 117681270 + RPS15AP9
Exon structure

441898 ENSG00000228453 ribosomal protein S15a pseudogene 9
100117700747 117700778 - GC01M117700



101117686209 117753556 - VTCN1
Exon structure
Hs.546434 79679 ENSG00000134258 V-set domain containing T cell activation inhibitor 1
102117812869 117827436 - GC01M117812



103117838142 117863958 + ENSG00000235202
Exon structure


ENSG00000235202
104117907521 117908095 - ENSG00000271427
Exon structure


ENSG00000271427
105117907435 117910070 - GC01M117908



106117910565 117963252 + GC01P117911



107117963932 117966317 + GC01P117966



108117973083 117973112 - GC01M117973



109117973392 117973421 - GC01M117974



110117973752 117973783 + GC01P117973



111117910071 118071494 + MAN1A2
Exon structure
Hs.435938 10905 ENSG00000198162 mannosidase, alpha, class 1A, member 2
112118036137 118037628 + GC01P118039



113118069961 118071491 + GC01P118072



114118092037 118092544 + VPS25P1
Exon structure

441899 ENSG00000226755 VPS25 pseudogene 1
115118139454 118148392 - AL157902.3
Exon structure
Hs.202533 100996263 ENSG00000236866 Uncharacterized LOC100996263 (est)
116118151493 118151519 + PIR50715
Exon structure




117118148556 118171011 + FAM46C
Exon structure
Hs.356216 54855 ENSG00000183508 family with sequence similarity 46, member C
118118182962 118184425 - LOC401959
Exon structure

401959 ENSG00000213262
119118231242 118231364 - GC01M118234



120118231243 118231364 - ENSG00000212266
Exon structure


ENSG00000212266
121118242051 118242881 - LOC100192389
Exon structure

100192389 ENSG00000270719
122118242651 118242864 - GC01M118243



123118319145 118319705 - GC01M118322



124118319145 118321531 - LOC100131261
Exon structure

100131261 ENSG00000228217
125118320271 118321523 + GC01P118324



126118320709 118321128 - GC01M118321



127118385615 118385641 - PIR41120
Exon structure




128118379076 118400566 - GC01M118382



129118392000 118392026 - PIR54237
Exon structure




130118406111 118411617 + GC01P118410



131118406107 118472302 - GDAP2
Exon structure
Hs.594430 54834 ENSG00000196505 ganglioside induced differentiation associated protein 2
132118465832 118465864 + GC01P118465



133118472343 118509165 + WDR3
Exon structure
Hs.310809 10885 ENSG00000065183 WD repeat domain 3
134118496484 118512741 - GC01M118497



135118505992 118509165 + GC01P118509



136118574369 118581965 - GC01M118574



137118496288 118727848 - SPAG17
Exon structure
Hs.528821 200162 ENSG00000155761 sperm associated antigen 17
138118616564 118623919 - GC01M118616



139118628601 118629785 - GC01M118628



140118738866 118749628 + GC01P118741



141118806995 118807112 - RNA5SP56
Exon structure

100873294 ENSG00000222209 RNA, 5S ribosomal pseudogene 56
142118967824 118967844 + GC01P118974



143118969495 118969627 + GC01P118973



144119156761 119158291 - PSMC1P12
Exon structure

644094 ENSG00000226126 proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene 12
145119156956 119158269 - GC01M119159



146119255616 119256301 + LOC100421281
Exon structure

100421281 ENSG00000229911
147119355403 119355456 + GC01P119359



148119405909 119405947 + PIR34052
Exon structure




149119425666 119532179 - TBX15
Exon structure
Hs.146196 6913 ENSG00000092607 T-box 15