an academic website of the in association with
GeneLoc Home GeneCards Home MalaCards Home About GeneLoc Contact Us

  Chromosome 1

   GeneLoc map region (51,392,901 - 55,517,375 bp) around gene/marker "SCP2"

   Explanation:
   SCP2 is located at 53,392,901-53,517,375 bp

    [ GeneLoc Home Page ]


     Please wait for results...

#
Start
(bp)
End
(bp)
Strand
Gene
Unigene cluster
Entrez Gene Id
Ensembl Id
Description
150905150 51425936 - FAF1
Exon structure
Hs.530402 11124 ENSG00000185104 Fas (TNFRSF6) associated factor 1
251426417 51440309 + CDKN2C
Exon structure
Hs.525324 1031 ENSG00000123080 cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)
351433354 51473356 - GC01M051437



451525509 51525577 + MIR4421
Exon structure

100616189 ENSG00000265538 microRNA 4421
551572893 51573001 + GC01P051574



651572894 51573003 + ENSG00000200262
Exon structure


ENSG00000200262
751567906 51613754 + C1orf185
Exon structure
Hs.176177 284546 ENSG00000204006 chromosome 1 open reading frame 185
851617574 51621124 + GC01P051619



951623317 51624212 - CFL1P2
Exon structure

391039 ENSG00000213478 cofilin 1 (non-muscle) pseudogene 2
1051654135 51654223 + ENSG00000239101
Exon structure


ENSG00000239101
1151656555 51656630 + ENSG00000221492
Exon structure


ENSG00000221492
1251660767 51700768 - ENSG00000203356
Exon structure


ENSG00000203356
1351696925 51697028 - ENSG00000238618
Exon structure


ENSG00000238618
1451716234 51717166 - RPS2P8
Exon structure

440589 ENSG00000233406 ribosomal protein S2 pseudogene 8
1551701943 51739127 + RNF11
Exon structure
Hs.309641 26994 ENSG00000123091 ring finger protein 11
1651730588 51731746 - ENSG00000236434
Exon structure


ENSG00000236434
1751752930 51810788 - TTC39A
Exon structure
Hs.112949 22996 ENSG00000085831 tetratricopeptide repeat domain 39A
1851795326 51800996 + ENSG00000261664
Exon structure


ENSG00000261664
1951837936 51838896 + LOC100422413
Exon structure

100422413 ENSG00000232027
2051847980 51848086 + RNU6-877P
Exon structure

hugo3109 ENSG00000206595 RNA, U6 small nuclear 877, pseudogene
2151847979 51848086 + GC01P051850



2251708005 52038303 - GC01M051712



2351708005 52038303 - GC01M051713



2451819935 51985000 - EPS15
Exon structure
Hs.83722 2060 ENSG00000085832 epidermal growth factor receptor pathway substrate 15
2551913606 51913717 - GC01M051917



2651927393 51929088 + ENSG00000238140
Exon structure


ENSG00000238140
2752004297 52004401 - RNU6-1281P
Exon structure

hugo2264 ENSG00000252032 RNA, U6 small nuclear 1281, pseudogene
2851983981 52027301 + ENSG00000227070
Exon structure


ENSG00000227070
2952020400 52060569 - CALR4P
Exon structure

441884 ENSG00000227742 calreticulin 4, pseudogene
3052058446 52060099 + GC01P052060



3152042851 52254891 + OSBPL9
Exon structure
Hs.21938 114883 ENSG00000117859 oxysterol binding protein-like 9
3252082545 52254891 + GC01P052082



3352172810 52173818 - GAPDHP51
Exon structure

100421271 ENSG00000236973 glyceraldehyde 3 phosphate dehydrogenase pseudogene 51
3452174734 52175612 + SLC25A6P3
Exon structure

100422686 ENSG00000232846 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 pseudogene 3
3552190446 52190568 - GC01M052192



3652190447 52190568 - ENSG00000212624
Exon structure


ENSG00000212624
3752196014 52196069 + GC01P052198



3852259637 52264824 + ENSG00000266993
Exon structure


ENSG00000266993
3952266700 52266979 + ENSG00000272175
Exon structure


ENSG00000272175
4052254863 52344609 - NRD1
Exon structure
Hs.584782 4898 ENSG00000078618 nardilysin (N-arginine dibasic convertase)
4152302016 52302074 - MIR761
Exon structure

100313892 ENSG00000212076 microRNA 761
4252322197 52326061 - GC01M052324



4352325450 52325807 + TSEN15P2
Exon structure

hugo3460 ENSG00000230604 TSEN15 tRNA splicing endonuclease subunit pseudogene 2
4452331304 52331381 + GC01P052333



4552331305 52331381 + ENSG00000212174
Exon structure


ENSG00000212174
4652366592 52366643 - ENSG00000265769
Exon structure


ENSG00000265769
4752373628 52456436 - RAB3B
Exon structure
Hs.123072 5865 ENSG00000169213 RAB3B, member RAS oncogene family
4852439081 52439207 + GC01P052442



4952439082 52439207 + RNA5SP48
Exon structure

100873287 ENSG00000200839 RNA, 5S ribosomal pseudogene 48
5052446145 52446492 + RPS26P14
Exon structure

100270902 ENSG00000229032 ribosomal protein S26 pseudogene 14
5152461406 52461711 + GC01P052471



5252461412 52461709 + RN7SL290P
Exon structure

hugo946 ENSG00000264613 RNA, 7SL, cytoplasmic 290, pseudogene
5352497778 52497924 + GC01P052504



5452497778 52497924 + GC01P052503



5552497775 52499488 - KTI12
Exon structure

112970 ENSG00000198841 KTI12 homolog, chromatin associated (S. cerevisiae)
5652485803 52521843 - TXNDC12
Exon structure
Hs.476033 51060 ENSG00000117862 thioredoxin domain containing 12 (endoplasmic reticulum)
5752499063 52509951 + ENSG00000223390
Exon structure


ENSG00000223390
5852516590 52518355 + TXNDC12-AS1
Exon structure

hugo3470 ENSG00000228369 TXNDC12 antisense RNA 1
5952522483 52522509 - PIR60864
Exon structure




6052521856 52554090 + GC01P052524



6152521797 52556388 + BTF3L4
Exon structure
Hs.429839 91408 ENSG00000134717 basic transcription factor 3-like 4
6252553419 52553448 + PIR34571
Exon structure




6352615777 52616089 + RN7SL788P
Exon structure

hugo1490 ENSG00000241745 RNA, 7SL, cytoplasmic 788, pseudogene
6452625678 52626273 - LOC100190934
Exon structure

100190934 ENSG00000228407
6552626715 52629158 - LOC724060
Exon structure

724060 ENSG00000223429
6652645487 52646366 + PDCL3P6
Exon structure

100419023 ENSG00000224255 phosducin-like 3 pseudogene 6
6752655577 52655981 - RPL9P12
Exon structure

100270825 ENSG00000236004 ribosomal protein L9 pseudogene 12
6852675188 52675215 + PIR48588
Exon structure




6952608046 52812358 + ZFYVE9
Exon structure
Hs.532345 9372 ENSG00000157077 zinc finger, FYVE domain containing 9
7052717734 52718445 - DNAJC19P7
Exon structure

100861458 ENSG00000237663 DnaJ (Hsp40) homolog, subfamily C, member 19 pseudogene 7
7152719239 52720067 + ANAPC10P1
Exon structure

729198 ENSG00000213735 anaphase promoting complex subunit 10 pseudogene 1
7252818207 52818489 - GC01M052824



7352819159 52819549 + ENSG00000272100
Exon structure


ENSG00000272100
7452811395 52831877 - CC2D1B
Exon structure
Hs.591451 200014 ENSG00000154222 coiled-coil and C2 domain containing 1B
7552834348 52834916 + PLA2G12AP1
Exon structure

100420258 ENSG00000224680 phospholipase A2, group XIIA pseudogene 1
7652838501 52870143 - ORC1
Exon structure
Hs.17908 4998 ENSG00000085840 origin recognition complex, subunit 1
7752877114 52877194 + ENSG00000239063
Exon structure


ENSG00000239063
7852870219 52886511 + PRPF38A
Exon structure
Hs.5301 84950 ENSG00000134748 pre-mRNA processing factor 38A
7952888956 52991570 - GC01M052891



8052873954 53019159 - ZCCHC11
Exon structure
Hs.655407 23318 ENSG00000134744 zinc finger, CCHC domain containing 11
8153020490 53020945 + ENSG00000272371
Exon structure


ENSG00000272371
8253038786 53039490 + EEF1GP7
Exon structure

645311 ENSG00000236290 eukaryotic translation elongation factor 1 gamma pseudogene 7
8353068043 53074723 + GPX7
Exon structure
Hs.43728 2882 ENSG00000116157 glutathione peroxidase 7
8453099016 53135355 + FAM159A
Exon structure
Hs.424589 348378 ENSG00000182183 family with sequence similarity 159, member A
8553140636 53140665 + PIR34624
Exon structure




8653152014 53164038 - SELRC1
Exon structure
Hs.349905 65260 ENSG00000162377 Sel1 repeat containing 1
8753174753 53175231 + NDUFS5P3
Exon structure

100288149 ENSG00000233664 NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase) pseudogene 3
8853180071 53180365 + RN7SL62P
Exon structure

hugo1317 ENSG00000239640 RNA, 7SL, cytoplasmic 62, pseudogene
8953219994 53220134 + RNU2-30P
Exon structure

hugo1811 ENSG00000252018 RNA, U2 small nuclear 30, pseudogene
9053237825 53238346 - RPS13P2
Exon structure

729236 ENSG00000228929 ribosomal protein S13 pseudogene 2
9153192126 53293014 + ZYG11B
Exon structure
Hs.476280 79699 ENSG00000162378 zyg-11 family member B, cell cycle regulator
9253270779 53270884 - GC01M053274



9353270780 53270884 - RNU6-969P
Exon structure

hugo3210 ENSG00000206627 RNA, U6 small nuclear 969, pseudogene
9453288114 53288143 + PIR35907
Exon structure




9553320147 53320175 + PIR36649
Exon structure




9653308183 53360670 + ZYG11A
Exon structure
Hs.658458 440590 ENSG00000203995 zyg-11 family member A, cell cycle regulator
9753346888 53347402 - ENSG00000242391
Exon structure


ENSG00000242391
9853352782 53352809 + PIR44076
Exon structure




9953359948 53359975 + PIR50670
Exon structure




10053364269 53364295 + PIR50883
Exon structure




10153361582 53392884 - ECHDC2
Exon structure
Hs.476319 55268 ENSG00000121310 enoyl CoA hydratase domain containing 2
10253386094 53386268 + ENSG00000230953
Exon structure


ENSG00000230953
10353390429 53391095 - LOC100652967
Exon structure

100652967

10453390921 53391095 - ENSG00000231866
Exon structure


ENSG00000231866
10553394346 53394444 + MIR1273F
Exon structure

100616156 ENSG00000264834 microRNA 1273f
10653400602 53400689 + MIR5095
Exon structure

100616458 ENSG00000266188 microRNA 5095
10753405986 53406085 + MIR1273G
Exon structure

100616145 ENSG00000265815 microRNA 1273g
10853409208 53409602 - ENSG00000237279
Exon structure


ENSG00000237279
10953392901 53517375 + SCP2
Exon structure
Hs.476365 6342 ENSG00000116171 sterol carrier protein 2
11053457454 53459374 - LOC100133211
Exon structure

100133211 ENSG00000236360
11153460398 53461698 + TUBBP10
Exon structure

100418902 ENSG00000226147 tubulin, beta class I pseudogene 10
11253538782 53539061 - HIGD1AP11
Exon structure

100874453 ENSG00000227644 HIG1 hypoxia inducible domain family, member 1A pseudogene 11
11353527724 53551174 + PODN
Exon structure
Hs.586141 127435 ENSG00000174348 podocan
11453535610 53551174 - ENSG00000232993
Exon structure


ENSG00000232993
11553552855 53608289 - SLC1A7
Exon structure
Hs.104637 6512 ENSG00000162383 solute carrier family 1 (glutamate transporter), member 7
11653580248 53584281 + ENSG00000235563
Exon structure


ENSG00000235563
11753586747 53587493 - GC01M053589



11853604927 53606505 - GC01M053606



11953651967 53652543 + LOC100420556
Exon structure

100420556

12053656724 53657133 + GC01P053658



12153662101 53679869 + CPT2
Exon structure
Hs.713535 1376 ENSG00000157184 carnitine palmitoyltransferase 2
12253676319 53676349 + GC01P053680



12353676319 53676349 + PIR39029
Exon structure




12453676128 53679447 - ENSG00000236723
Exon structure


ENSG00000236723
12553678992 53679019 + PIR34935
Exon structure




12653679771 53686289 - C1orf123
Exon structure
Hs.525391 54987 ENSG00000162384 chromosome 1 open reading frame 123
12753686963 53686992 + PIR31553
Exon structure




12853686335 53689925 + ENSG00000259818
Exon structure


ENSG00000259818
12953692564 53704282 - MAGOH
Exon structure
Hs.421576 4116 ENSG00000162385 mago-nashi homolog, proliferation-associated (Drosophila)
13053704282 53708455 + LOC100507564
Exon structure
Hs.592502 100507564 ENSG00000226754 Uncharacterized LOC100507564 (est)
13153708036 53710212 - ENSG00000270172
Exon structure


ENSG00000270172
13253733607 53734273 + ENSG00000234578
Exon structure


ENSG00000234578
13353708036 53793821 - LRP8
Exon structure
Hs.280387 7804 ENSG00000157193 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
13453753696 53755378 + ENSG00000228838
Exon structure


ENSG00000228838
13553757463 53757810 - ENSG00000225030
Exon structure


ENSG00000225030
13653770208 53773134 + ENSG00000232762
Exon structure


ENSG00000232762
13753771124 53774157 - GC01M053773



13853793905 53802181 + ENSG00000225675
Exon structure


ENSG00000225675
13953798547 53806483 - GC01M053802



14053814160 53814905 - ENSG00000226938
Exon structure


ENSG00000226938
14153832340 53833917 - ENSG00000230138
Exon structure


ENSG00000230138
14253878821 53905693 - SLC25A3P1
Exon structure
Hs.99394 163742 ENSG00000236253 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 pseudogene 1
14353904043 53905693 - GC01M053908



14453905447 53905770 + GC01P053908



14553925072 53933161 + DMRTB1
Exon structure
Hs.131654 63948 ENSG00000143006 DMRT-like family B with proline-rich C-terminal, 1
14654040172 54040198 - PIR60882
Exon structure




14754043323 54043353 - PIR62070
Exon structure




14854055917 54055947 - PIR52518
Exon structure




14953971906 54199877 - GLIS1
Exon structure
Hs.306691 148979 ENSG00000174332 GLIS family zinc finger 1
15054138668 54138694 - PIR51865
Exon structure




15154154422 54154485 - RNU7-95P
Exon structure

hugo3382 ENSG00000239007 RNA, U7 small nuclear 95 pseudogene
15254236690 54236826 - GC01M054238



15354236691 54236826 - ENSG00000201003
Exon structure


ENSG00000201003
15454231133 54304533 - NDC1
Exon structure
Hs.476525 55706 ENSG00000058804 NDC1 transmembrane nucleoporin
15554294465 54294534 + ENSG00000264454
Exon structure


ENSG00000264454
15654307218 54307507 + RPL37P7
Exon structure

100270890 ENSG00000229687 ribosomal protein L37 pseudogene 7
15754317391 54355487 - GC01M054318



15854317392 54356407 - YIPF1
Exon structure
Hs.11923 54432 ENSG00000058799 Yip1 domain family, member 1
15954356912 54376759 + DIO1
Exon structure
Hs.251415 1733 ENSG00000211452 deiodinase, iodothyronine, type I
16054376646 54376704 + GC01P054380



16154387382 54395775 - GC01M054396



16254387383 54395775 - GC01M054397



16354387382 54395775 - GC01M054395



16454382247 54411602 - HSPB11
Exon structure
Hs.525462; Hs.624686 51668 ENSG00000081870 heat shock protein family B (small), member 11
16554411750 54433841 + LRRC42
Exon structure
Hs.40094 115353 ENSG00000116212 leucine rich repeat containing 42
16654440642 54441704 - HNRNPA3P12
Exon structure

100421395 ENSG00000219102 heterogeneous nuclear ribonucleoprotein A3 pseudogene 12
16754447916 54452234 + GC01P054450



16854474412 54483856 - LDLRAD1
Exon structure
Hs.439583 388633 ENSG00000203985 low density lipoprotein receptor class A domain containing 1
16954481327 54481616 + ENSG00000197015
Exon structure


ENSG00000197015
17054492356 54494172 - ENSG00000272091
Exon structure


ENSG00000272091
17154498816 54500553 - ENSG00000203276
Exon structure


ENSG00000203276
17254497347 54519177 - TMEM59
Exon structure
Hs.523262 9528 ENSG00000116209 transmembrane protein 59
17354502282 54519078 - GC01M054506



17454502283 54519078 - GC01M054507



17554519752 54519827 + MIR4781
Exon structure

100616315 ENSG00000264208 microRNA 4781
17654519260 54578192 + TCEANC2
Exon structure
Hs.558618 127428 ENSG00000116205 transcription elongation factor A (SII) N-terminal and central domain containing 2
17754555529 54555771 + LOC100507586
Exon structure

100507586 ENSG00000225183
17854565641 54565897 - ENSG00000237611
Exon structure


ENSG00000237611
17954569968 54571750 + ENSG00000212670
Exon structure


ENSG00000212670
18054604045 54608653 + GC01P054606



18154598747 54619443 - CDCP2
Exon structure
Hs.568555 200008 ENSG00000157211 CUB domain containing protein 2
18254606897 54665746 - ENSG00000256407
Exon structure


ENSG00000256407
18354635333 54637997 - ENSG00000248835
Exon structure


ENSG00000248835
18454650968 54651727 - GC01M054652



18554638009 54665746 - CYB5RL
Exon structure
Hs.591426 606495 ENSG00000215883 cytochrome b5 reductase-like
18654649714 54691137 + MRPL37
Exon structure
Hs.584908 51253 ENSG00000116221 mitochondrial ribosomal protein L37
18754681841 54681867 + PIR51493
Exon structure




18854687088 54687117 + PIR40840
Exon structure




18954692551 54692719 + GC01P054694



19054703710 54704736 + SSBP3-AS1
Exon structure
Hs.591438 619518 ENSG00000198711 SSBP3 antisense RNA 1
19154751078 54753044 + ENSG00000225632
Exon structure


ENSG00000225632
19254754672 54755520 - GC01M054756



19354691105 54879152 - SSBP3
Exon structure
Hs.658676 23648 ENSG00000157216 single stranded DNA binding protein 3
19454822146 54822338 + GC01P054825



19554873771 54873798 + PIR46432
Exon structure




19654878380 54879139 - GC01M054881



19754881929 54886533 + ENSG00000232245
Exon structure


ENSG00000232245
19854970341 54970443 + ENSG00000265404
Exon structure


ENSG00000265404
19954982085 54982932 - ENSG00000235741
Exon structure


ENSG00000235741
20054982176 54983024 + GC01P054986



20154990059 54990887 + TALDO1P1
Exon structure

6889 ENSG00000237173 transaldolase 1 pseudogene 1
20254991059 54991126 + ENSG00000252646
Exon structure


ENSG00000252646
20355002469 55003431 + HNRNPA1P63
Exon structure

645436 ENSG00000227453 heterogeneous nuclear ribonucleoprotein A1 pseudogene 63
20455007930 55104865 + ACOT11
Exon structure
Hs.745173 26027 ENSG00000162390 acyl-CoA thioesterase 11
20555074850 55089229 - FAM151A
Exon structure
Hs.234786 338094 ENSG00000162391 family with sequence similarity 151, member A
20655087150 55094111 - ENSG00000230728
Exon structure


ENSG00000230728
20755107427 55175939 + MROH7
Exon structure
Hs.412482 374977 ENSG00000184313 maestro heat-like repeat family member 7
20855107459 55207981 + ENSG00000271723
Exon structure


ENSG00000271723
20955107426 55208328 + GC01P055114



21055107427 55208330 + MROH7-TTC4
Exon structure

100527960
MROH7-TTC4 readthrough (NMD candidate)
21155181495 55208330 + TTC4
Exon structure
Hs.729029 7268 ENSG00000243725 tetratricopeptide repeat domain 4
21255224690 55224716 - PIR47125
Exon structure




21355222571 55230226 - PARS2
Exon structure
Hs.380169 25973 ENSG00000162396 prolyl-tRNA synthetase 2, mitochondrial (putative)
21455245385 55266941 - TTC22
Exon structure
Hs.16230 55001 ENSG00000006555 tetratricopeptide repeat domain 22
21555258558 55260578 + ENSG00000237453
Exon structure


ENSG00000237453
21655267049 55267075 - PIR51709
Exon structure




21755271736 55307937 + C1orf177
Exon structure
Hs.376018 163747 ENSG00000162398 chromosome 1 open reading frame 177
21855315300 55352921 - DHCR24
Exon structure
Hs.498727 1718 ENSG00000116133 24-dehydrocholesterol reductase
21955341623 55341650 - PIR36544
Exon structure




22055352548 55353674 + ENSG00000242396
Exon structure


ENSG00000242396
22155353236 55354523 + ENSG00000233203
Exon structure


ENSG00000233203
22255411670 55411697 + PIR41856
Exon structure




22355423541 55423614 - GC01M055427



22455423542 55423614 - TRNAK-CUU
Exon structure

100126514

22555446465 55457966 + TMEM61
Exon structure
Hs.663950 199964 ENSG00000143001 transmembrane protein 61
22655446623 55457947 - ENSG00000233271
Exon structure


ENSG00000233271
22755461469 55462838 + GC01P055463



22855464606 55476556 + BSND
Exon structure
Hs.151291 7809 ENSG00000162399 Bartter syndrome, infantile, with sensorineural deafness (Barttin)
22955505149 55530526 + PCSK9
Exon structure
Hs.18844 255738 ENSG00000169174 proprotein convertase subtilisin/kexin type 9