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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 1

   GeneLoc map region (156,610,498 - 160,686,716 bp) around gene/marker "SPTA1"

   Explanation:
   SPTA1 is located at 158,610,498-158,686,716 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
1156614742 156621928 - LOC101928177
Exon structure

101928177 ENSG00000272971
2156618801 156625725 + HAPLN2
Exon structure
Hs.410719 60484 ENSG00000132702 hyaluronan and proteoglycan link protein 2
3156637783 156641004 - ENSG00000272068
Exon structure


ENSG00000272068
4156641666 156644887 - ENSG00000272405
Exon structure


ENSG00000272405
5156641390 156659532 + BCAN
Exon structure
Hs.516904 63827 ENSG00000132692 brevican
6156645725 156661441 - LOC105371453
Exon structure

105371453 ENSG00000229953
7156668288 156668826 + GC01P156668



8156668763 156677397 - NES
Exon structure
Hs.527971 10763 ENSG00000132688 nestin
9156687695 156691997 - ENSG00000237588
Exon structure


ENSG00000237588
10156699606 156705816 - CRABP2
Exon structure
Hs.405662 1382 ENSG00000143320 cellular retinoic acid binding protein 2
11156706329 156713174 - LOC105371454
Exon structure

105371454 ENSG00000223356
12156723058 156723086 - PIR43567
Exon structure




13156725328 156725357 - PIR61627
Exon structure




14156721891 156728799 - ISG20L2
Exon structure
Hs.301904 81875 ENSG00000143319 interferon stimulated exonuclease gene 20kDa-like 2
15156724274 156732465 - GC01M156724



16156728442 156736960 + RRNAD1
Exon structure
Hs.512597 51093 ENSG00000143303 ribosomal RNA adenine dimethylase domain containing 1
17156737302 156741590 - MRPL24
Exon structure
Hs.418233 79590 ENSG00000143314 mitochondrial ribosomal protein L24
18156741050 156741076 - PIR36837
Exon structure




19156742107 156766925 - HDGF
Exon structure
Hs.743948 3068 ENSG00000143321 hepatoma-derived growth factor
20156750610 156800817 + PRCC
Exon structure
Hs.516948 5546 ENSG00000143294 papillary renal cell carcinoma (translocation-associated)
21156806243 156816862 - SH2D2A
Exon structure
Hs.103527 9047 ENSG00000027869 SH2 domain containing 2A
22156814716 156824117 + GC01P156814



23156815640 156881850 + NTRK1
Exon structure
Hs.406293 4914 ENSG00000198400 neurotrophic tyrosine kinase, receptor, type 1
24156840063 156859018 - INSRR
Exon structure
Hs.248138 3645 ENSG00000027644 insulin receptor-related receptor
25156849688 156866418 - GC01M156849



26156858537 156858874 - GC01M156858



27156893692 156916434 + PEAR1
Exon structure
Hs.142003 375033 ENSG00000187800 platelet endothelial aggregation receptor 1
28156920608 156942683 + LRRC71
Exon structure
Hs.491734 149499 ENSG00000160838 leucine rich repeat containing 71
29156936131 156936244 - MIR765
Exon structure

768220 ENSG00000211581 microRNA 765
30156919766 157033475 + GC01P156919



31156985755 156986049 - RN7SL612P
Exon structure

106479445 ENSG00000266160 RNA, 7SL, cytoplasmic 612, pseudogene
32156985758 156986049 - GC01M156985



33156934840 157046640 - ARHGEF11
Exon structure
Hs.516954 9826 ENSG00000132694 Rho guanine nucleotide exchange factor (GEF) 11
34157050052 157051683 - LOC102724222
Exon structure

102724222

35157058910 157060804 - LOC246784
Exon structure

246784 ENSG00000237842
36157073181 157074898 + KRT8P45
Exon structure

149501 ENSG00000224520 keratin 8 pseudogene 45
37157092043 157099808 - ETV3L
Exon structure
Hs.127138 440695 ENSG00000253831 ets variant 3-like
38157128362 157128671 + CYCSP52
Exon structure
Hs.491808 360155 ENSG00000235700 cytochrome c, somatic pseudogene 52
39157121191 157138591 - ETV3
Exon structure
Hs.105636 2117 ENSG00000117036 ets variant 3
40157185388 157187405 + ENSG00000229961
Exon structure


ENSG00000229961
41157225413 157279272 - LOC105371456
Exon structure

105371456 ENSG00000228239
42157275009 157283617 + LOC105371455
Exon structure

105371455 ENSG00000271736
43157284342 157311377 - LOC101928202
Exon structure

101928202 ENSG00000237189
44157371070 157371096 - PIR34529
Exon structure




45157377080 157377107 - PIR37473
Exon structure




46157459111 157459140 - PIR47732
Exon structure




47157408862 157554683 + GC01P157412



48157491569 157491595 + PIR37671
Exon structure




49157493985 157494012 + PIR33564
Exon structure




50157513377 157552520 - FCRL5
Exon structure
Hs.415950 83416 ENSG00000143297 Fc receptor-like 5
51157573749 157598080 - FCRL4
Exon structure
Hs.120260 83417 ENSG00000163518 Fc receptor-like 4
52157629939 157630728 - ENSG00000236731
Exon structure


ENSG00000236731
53157636300 157640301 - ENSG00000233712
Exon structure


ENSG00000233712
54157653129 157660145 - LOC105371457
Exon structure

105371457

55157674321 157700985 - FCRL3
Exon structure
Hs.292449 115352 ENSG00000160856 Fc receptor-like 3
56157691762 157696459 + ENSG00000227217
Exon structure


ENSG00000227217
57157708996 157711485 + SONP1
Exon structure

148300 ENSG00000231700 SON pseudogene 1
58157724180 157725026 - VDAC1P9
Exon structure

391106 ENSG00000232366 voltage-dependent anion channel 1 pseudogene 9
59157745733 157777439 - FCRL2
Exon structure
Hs.437393 79368 ENSG00000132704 Fc receptor-like 2
60157773295 157773321 + PIR43091
Exon structure




61157792249 157820150 - FCRL1
Exon structure
Hs.656112 115350 ENSG00000163534 Fc receptor-like 1
62157861139 157861616 + MRPS21P2
Exon structure

359766 ENSG00000227425 mitochondrial ribosomal protein S21 pseudogene 2
63157827071 157898256 - CD5L
Exon structure
Hs.134035 922 ENSG00000073754 CD5 molecule-like
64157862846 157931144 + LOC100996284
Exon structure

100996284

65157925065 157949071 + ENSG00000236957
Exon structure


ENSG00000236957
66157948476 157950921 + LOC105371458
Exon structure

105371458

67157979311 157986183 + LOC105371459
Exon structure

105371459

68158025550 158031166 + KIRREL-IT1
Exon structure
Hs.664656 100505785 ENSG00000226520 KIRREL intronic transcript 1
69157993273 158100262 + KIRREL
Exon structure
Hs.609291; Hs.657006 55243 ENSG00000183853 kin of IRRE like (Drosophila)
70158132044 158140640 - LOC646268
Exon structure
Hs.506902 646268 ENSG00000231666 HCG1654703 (est)
71158140725 158170029 + LOC105371460
Exon structure

105371460

72158174353 158178075 - ELL2P1
Exon structure

646270 ENSG00000227295 elongation factor, RNA polymerase II, 2 pseudogene 1
73158178038 158186427 + CD1D
Exon structure
Hs.1799 912 ENSG00000158473 CD1d molecule
74158195582 158196167 - RPS10P8
Exon structure

729780 ENSG00000229914 ribosomal protein S10 pseudogene 8
75158195633 158196131 - GC01M158195



76158197922 158203877 - ENSG00000176320
Exon structure


ENSG00000176320
77158217392 158221133 + GC01P158217



78158234964 158239757 + GC01P158234



79158248329 158258269 + CD1A
Exon structure
Hs.1309 909 ENSG00000158477 CD1a molecule
80158257036 158257120 + GC01P158261



81158257036 158257120 + GC01P158260



82158266753 158267320 - HMGN1P5
Exon structure

100874429 ENSG00000230942 high mobility group nucleosome binding domain 1 pseudogene 5
83158286812 158288274 + GC01P158286



84158289773 158294774 + CD1C
Exon structure
Hs.132448 911 ENSG00000158481 CD1c molecule
85158292852 158292903 + GC01P158293



86158292852 158292903 + GC01P158292



87158327950 158331531 - CD1B
Exon structure
Hs.1310 910 ENSG00000158485 CD1b molecule
88158353435 158357553 + CD1E
Exon structure
Hs.249217 913 ENSG00000158488 CD1e molecule
89158398525 158399466 - OR10T2
Exon structure
Hs.553588 128360 ENSG00000186306 olfactory receptor, family 10, subfamily T, member 2
90158419931 158420866 - OR10K2
Exon structure
Hs.626815 391107 ENSG00000180708 olfactory receptor, family 10, subfamily K, member 2
91158445073 158446014 - OR10T1P
Exon structure

79514 ENSG00000203758 olfactory receptor, family 10, subfamily T, member 1 pseudogene
92158454198 158455273 + EI24P2
Exon structure

100129866 ENSG00000236257 etoposide induced 2.4 pseudogene 2
93158465562 158466500 + OR10K1
Exon structure
Hs.690410 391109 ENSG00000173285 olfactory receptor, family 10, subfamily K, member 1
94158479911 158480882 + OR10R2
Exon structure
Hs.451913 343406 ENSG00000198965 olfactory receptor, family 10, subfamily R, member 2
95158474454 158494886 - ENSG00000236656
Exon structure


ENSG00000236656
96158491219 158492157 + OR10R3P
Exon structure
Hs.640254 391110 ENSG00000198703 olfactory receptor, family 10, subfamily R, member 3 pseudogene
97158514901 158515925 + OR10R1P
Exon structure

79513 ENSG00000227445 olfactory receptor, family 10, subfamily R, member 1 pseudogene
98158515359 158515385 + PIR51759
Exon structure




99158523613 158526480 + HSP90AA3P
Exon structure

3322 ENSG00000231434 heat shock protein 90kDa alpha (cytosolic), class A member 3, pseudogene
100158547131 158548105 - OR6Y1
Exon structure
Hs.553780 391112 ENSG00000197532 olfactory receptor, family 6, subfamily Y, member 1
101158562654 158563604 - OR6P1
Exon structure
Hs.723122 128366 ENSG00000186440 olfactory receptor, family 6, subfamily P, member 1
102158578922 158579848 - OR10X1
Exon structure
Hs.553589 128367 ENSG00000186400 olfactory receptor, family 10, subfamily X, member 1 (gene/pseudogene)
103158606439 158607377 + OR10Z1
Exon structure
Hs.553590 128368 ENSG00000198967 olfactory receptor, family 10, subfamily Z, member 1
104158610498 158686716 - SPTA1
Exon structure
Hs.119825 6708 ENSG00000163554 spectrin, alpha, erythrocytic 1
105158694539 158695509 - OR6K1P
Exon structure

81449 ENSG00000231237 olfactory receptor, family 6, subfamily K, member 1 pseudogene
106158699681 158700652 - OR6K2
Exon structure
Hs.554489 81448 ENSG00000196171 olfactory receptor, family 6, subfamily K, member 2
107158717171 158718115 - OR6K3
Exon structure
Hs.554488 391114 ENSG00000203757 olfactory receptor, family 6, subfamily K, member 3
108158724155 158725036 - OR6K4P
Exon structure

128370 ENSG00000180437 olfactory receptor, family 6, subfamily K, member 4 pseudogene
109158723348 158728460 - GC01M158723



110158742568 158743415 - OR6K5P
Exon structure

391115 ENSG00000226949 olfactory receptor, family 6, subfamily K, member 5 pseudogene
111158754921 158755844 + OR6K6
Exon structure
Hs.553591 128371 ENSG00000180433 olfactory receptor, family 6, subfamily K, member 6
112158765747 158766682 - OR6N1
Exon structure
Hs.553592 128372 ENSG00000197403 olfactory receptor, family 6, subfamily N, member 1
113158776685 158777635 - OR6N2
Exon structure
Hs.554487 81442 ENSG00000188340 olfactory receptor, family 6, subfamily N, member 2
114158795997 158796237 + OR2AQ1P
Exon structure

81474 ENSG00000229724 olfactory receptor, family 2, subfamily AQ, member 1 pseudogene
115158808402 158809335 - OR10AA1P
Exon structure

81487 ENSG00000180409 olfactory receptor, family 10, subfamily AA, member 1 pseudogene
116158831317 158849506 + MNDA
Exon structure
Hs.153837 4332 ENSG00000163563 myeloid cell nuclear differentiation antigen
117158878746 158883500 + PYHIN5P
Exon structure

646377 ENSG00000229849 pyrin and HIN domain family, member 5, pseudogene
118158930796 158988872 + PYHIN1
Exon structure
Hs.745322 149628 ENSG00000163564 pyrin and HIN domain family, member 1
119158962445 158962472 + PIR57461
Exon structure




120159011926 159014944 - GC01M159011



121158999968 159055155 + IFI16
Exon structure
Hs.380250 3428 ENSG00000163565 interferon, gamma-inducible protein 16
122159056127 159057750 - LOC105371461
Exon structure

105371461

123159059237 159059326 + ENSG00000265589
Exon structure


ENSG00000265589
124159080940 159081795 - RAD1P2
Exon structure

100129690 ENSG00000233473 RAD1 pseudogene 2
125159062479 159147096 - AIM2
Exon structure
Hs.733411 9447 ENSG00000163568 absent in melanoma 2
126159141610 159141684 - GC01M159143



127159141611 159141684 - TRR-TCT4-1
Exon structure

100189166
transfer RNA-Arg (TCT) 4-1
128159178473 159178559 + RNA5SP60
Exon structure

100873295 ENSG00000222552 RNA, 5S ribosomal pseudogene 60
129159171587 159203313 + CADM3
Exon structure
Hs.365689 57863 ENSG00000162706 cell adhesion molecule 3
130159194325 159207973 - CADM3-AS1
Exon structure
Hs.701271 100131825 ENSG00000225670 CADM3 antisense RNA 1
131159203307 159206500 + ACKR1
Exon structure
Hs.153381 2532 ENSG00000213088 atypical chemokine receptor 1 (Duffy blood group)
132159276503 159277182 + MPTX1
Exon structure

649458 ENSG00000215846 mucosal pentraxin 1 (pseudogene)
133159279044 159280001 - OR10J2P
Exon structure

391117 ENSG00000248642 olfactory receptor, family 10, subfamily J, member 2 pseudogene
134159283888 159308224 + FCER1A
Exon structure
Hs.897 2205 ENSG00000179639 Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
135159313673 159314659 - OR10J3
Exon structure
Hs.553833 441911 ENSG00000196266 olfactory receptor, family 10, subfamily J, member 3
136159351051 159352023 + OR10J7P
Exon structure

391119 ENSG00000248442 olfactory receptor, family 10, subfamily J, member 7 pseudogene
137159366161 159367086 + OR10J8P
Exon structure

343409 ENSG00000251686 olfactory receptor, family 10, subfamily J, member 8 pseudogene
138159405423 159406409 - OR10J9P
Exon structure

391120 ENSG00000249197 olfactory receptor, family 10, subfamily J, member 9 pseudogene
139159346166 159469068 - ENSG00000228560
Exon structure


ENSG00000228560
140159439792 159440718 + OR10J1
Exon structure
Hs.532661 26476 ENSG00000196184 olfactory receptor, family 10, subfamily J, member 1
141159432204 159433138 + OR10J4
Exon structure

391121 ENSG00000249730 olfactory receptor, family 10, subfamily J, member 4 (gene/pseudogene)
142159466104 159490491 + LOC105371462
Exon structure

105371462 ENSG00000224943
143159492998 159493024 - PIR55863
Exon structure




144159509919 159534693 + LOC105371463
Exon structure

105371463

145159535081 159536007 - OR10J5
Exon structure
Hs.553587 127385 ENSG00000184155 olfactory receptor, family 10, subfamily J, member 5
146159557368 159558200 + LOC646430
Exon structure

646430 ENSG00000231100
147159502192 159638143 + GC01P159502



148159581623 159582220 - OR10AE1P
Exon structure

81486 ENSG00000271890 olfactory receptor, family 10, subfamily AE, member 1 pseudogene
149159580470 159584414 - GC01M159580



150159587825 159588871 + APCS
Exon structure
Hs.507080 325 ENSG00000132703 amyloid P component, serum
151159598298 159599224 + OR10J6P
Exon structure

401973 ENSG00000158731 olfactory receptor, family 10, subfamily J, member 6 pseudogene
152159603836 159604301 - GC01M159603



153159607416 159609365 - GC01M159607



154159608892 159610103 + GC01P159608



155159649151 159649620 + ENSG00000276632
Exon structure


ENSG00000276632
156159704950 159705607 - CRPP1
Exon structure

171422 ENSG00000223603 C-reactive protein pseudogene 1
157159712289 159714609 - CRP
Exon structure
Hs.76452; Hs.709456 1401 ENSG00000132693 C-reactive protein, pentraxin-related
158159759144 159759620 + RPL27P2
Exon structure

646446 ENSG00000235226 ribosomal protein L27 pseudogene 2
159159776472 159780820 - LOC101928264
Exon structure

101928264

160159780932 159782543 + DUSP23
Exon structure
Hs.425801 54935 ENSG00000158716 dual specificity phosphatase 23
161159800481 159806589 - LOC105371464
Exon structure

105371464

162159800511 159816257 + FCRL6
Exon structure
Hs.196955 343413 ENSG00000181036 Fc receptor-like 6
163159826650 159837497 + SLAMF8
Exon structure
Hs.438683 56833 ENSG00000158714 SLAM family member 8
164159841658 159844670 - GC01M159841



165159834474 159855347 - C1orf204
Exon structure

284677 ENSG00000188004 chromosome 1 open reading frame 204
166159842321 159849260 - LOC105373478
Exon structure

105373478

167159851906 159851972 - ENSG00000212161
Exon structure


ENSG00000212161
168159851905 159851972 - GC01M159852



169159854316 159862657 - VSIG8
Exon structure
Hs.647718 391123 ENSG00000243284 V-set and immunoglobulin domain containing 8
170159857900 159873053 - ENSG00000256029
Exon structure


ENSG00000256029
171159866954 159867685 + ENSG00000272668
Exon structure


ENSG00000272668
172159872364 159900163 - CFAP45
Exon structure
Hs.647705 25790 ENSG00000213085 cilia and flagella associated protein 45
173159899979 159900079 - MIR4259
Exon structure

100422852 ENSG00000266458 microRNA 4259
174159886834 159918008 - GC01M159886



175159904171 159904201 + GC01P159904



176159904171 159904201 + PIR60584
Exon structure




177159910094 159910554 - ENSG00000279430
Exon structure


ENSG00000279430
178159918397 159918653 - GC01M159919



179159918107 159925732 - TAGLN2
Exon structure
Hs.517168 8407 ENSG00000158710 transgelin 2
180159927039 159945604 - IGSF9
Exon structure
Hs.591472 57549 ENSG00000085552 immunoglobulin superfamily, member 9
181159951492 159954254 - SLAMF9
Exon structure
Hs.661712 89886 ENSG00000162723 SLAM family member 9
182159961218 159979086 + LINC01133
Exon structure
Hs.445045 100505633 ENSG00000224259 long intergenic non-protein coding RNA 1133
183159972548 159974068 - FCRL6P1
Exon structure

100419077 ENSG00000273933 Fc receptor-like 6 pseudogene 1
184160018009 160020784 + RPL27AP2
Exon structure

391124 ENSG00000237409 ribosomal protein L27a pseudogene 2
185160020300 160020727 + GC01P160020



186160024953 160026794 - ENSG00000260766
Exon structure


ENSG00000260766
187160027672 160031993 - PIGM
Exon structure
Hs.552810 93183 ENSG00000143315 phosphatidylinositol glycan anchor biosynthesis, class M
188160037467 160070261 - KCNJ10
Exon structure
Hs.408960 3766 ENSG00000177807 potassium channel, inwardly rectifying subfamily J, member 10
189160057212 160079821 + LOC105371465
Exon structure

105371465 ENSG00000225279
190160079953 160090563 + KCNJ9
Exon structure
Hs.66726 3765 ENSG00000162728 potassium channel, inwardly rectifying subfamily J, member 9
191160091339 160098943 - IGSF8
Exon structure
Hs.332012 93185 ENSG00000162729 immunoglobulin superfamily, member 8
192160125135 160125253 + GC01P160126



193160125135 160125253 + GC01P160125



194160128697 160128745 - GC01M160128



195160115730 160143591 + ATP1A2
Exon structure
Hs.34114 477 ENSG00000018625 ATPase, Na+/K+ transporting, alpha 2 polypeptide
196160151562 160186977 + ATP1A4
Exon structure
Hs.662219 480 ENSG00000132681 ATPase, Na+/K+ transporting, alpha 4 polypeptide
197160171622 160171757 + GC01P160171



198160190495 160201886 + CASQ1
Exon structure
Hs.632476 844 ENSG00000143318 calsequestrin 1 (fast-twitch, skeletal muscle)
199160205377 160205464 + ENSG00000265381
Exon structure


ENSG00000265381
200160202199 160208869 - LOC729867
Exon structure
Hs.674191 729867 ENSG00000227741 Uncharacterized LOC729867 (est)
201160205319 160215376 + PEA15
Exon structure
Hs.517216 8682 ENSG00000162734 phosphoprotein enriched in astrocytes 15
202160214576 160214602 + PIR40871
Exon structure




203160215715 160262560 - DCAF8
Exon structure
Hs.632447 50717 ENSG00000132716 DDB1 and CUL4 associated factor 8
204160217464 160285130 - ENSG00000258465
Exon structure


ENSG00000258465
205160261744 160262778 + ENSG00000228606
Exon structure


ENSG00000228606
206160261737 160264731 + GC01P160261



207160266269 160267303 - RPSAP18
Exon structure

388707 ENSG00000224261 ribosomal protein SA pseudogene 18
208160276809 160286348 - PEX19
Exon structure
Hs.517232 5824 ENSG00000162735 peroxisomal biogenesis factor 19
209160288587 160343564 - COPA
Exon structure
Hs.685025; Hs.162121 1314 ENSG00000122218 coatomer protein complex, subunit alpha
210160317265 160318474 + SUMO1P3
Exon structure
Hs.621179 474338 ENSG00000235082 SUMO1 pseudogene 3 (functional)
211160326104 160326216 - ENSG00000202078
Exon structure


ENSG00000202078
212160326105 160326216 - GC01M160326



213160286369 160372848 + NHLH1
Exon structure
Hs.30956 4807 ENSG00000171786 nescient helix loop helix 1
214160343272 160358952 + NCSTN
Exon structure
Hs.517249 23385 ENSG00000162736 nicastrin
215160354460 160358715 + GC01P160354



216160375506 160408444 - LOC105371466
Exon structure

105371466

217160392768 160392909 - RNU4-42P
Exon structure

106479577 ENSG00000201608 RNA, U4 small nuclear 42, pseudogene
218160400574 160428678 + VANGL2
Exon structure
Hs.99477 57216 ENSG00000162738 VANGL planar cell polarity protein 2
219160432865 160438177 - LOC105371467
Exon structure

105371467

220160485030 160523262 - SLAMF6
Exon structure
Hs.492348 114836 ENSG00000162739 SLAM family member 6
221160536577 160571458 + LOC105371468
Exon structure

105371468 ENSG00000234425
222160541094 160579516 - CD84
Exon structure
Hs.398093 8832 ENSG00000066294 CD84 molecule
223160608100 160647537 - SLAMF1
Exon structure
Hs.523660 6504 ENSG00000117090 signaling lymphocytic activation molecule family member 1
224160670148 160670981 + SETP9
Exon structure

100129738 ENSG00000235101 SET pseudogene 9
225160684431 160685526 + GC01P160684



226160670778 160699761 + ENSG00000228863
Exon structure


ENSG00000228863
227160678746 160711851 - CD48
Exon structure
Hs.243564 962 ENSG00000117091 CD48 molecule