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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 1

   GeneLoc map region (108,145,889 - 112,155,705 bp) around gene/marker "GNAT2"

   Explanation:
   GNAT2 is located at 110,145,889-110,155,705 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
1108138917 108231150 - GC01M108138



2108246245 108246404 + GC01P108249



3108113782 108507766 - VAV3
Exon structure
Hs.267659 10451 ENSG00000134215 vav 3 guanine nucleotide exchange factor
4108318796 108318878 - ENSG00000265536
Exon structure


ENSG00000265536
5108507065 108537229 + VAV3-AS1
Exon structure
Hs.568676 100873946 ENSG00000230489 VAV3 antisense RNA 1
6108561275 108561393 - ENSG00000264753
Exon structure


ENSG00000264753
7108593041 108594976 + GC01P108596



8108614104 108617141 + ENSG00000226822
Exon structure


ENSG00000226822
9108672805 108672832 - PIR34712
Exon structure




10108703035 108703065 + PIR34395
Exon structure




11108703503 108703535 + GC01P108706



12108676658 108743471 - SLC25A24
Exon structure
Hs.656870 29957 ENSG00000085491 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
13108742548 108744113 + ENSG00000260879
Exon structure


ENSG00000260879
14108765963 108786703 - NBPF4
Exon structure
Hs.511849 148545 ENSG00000196427 neuroblastoma breakpoint family, member 4
15108780359 108780385 + PIR59805
Exon structure




16108783578 108783607 + PIR43465
Exon structure




17108784573 108784600 + PIR45659
Exon structure




18108785779 108785809 + GC01P108799



19108785779 108785809 + GC01P108801



20108785779 108785809 + GC01P108796



21108785779 108785809 + PIR58927
Exon structure




22108785779 108785809 + GC01P108800



23108786203 108786229 + PIR31794
Exon structure




24108786303 108786329 + PIR46368
Exon structure




25108786537 108786565 + PIR39857
Exon structure




26108803818 108816311 - GC01M108804



27108850819 108850847 + PIR51093
Exon structure




28108853240 108853268 + PIR31896
Exon structure




29108815565 108918572 + SLC25A24P1
Exon structure

727941 ENSG00000241361 SLC25A24 pseudogene 1
30108881846 108881877 + GC01P108881



31108919314 108919344 - GC01M108919



32108918460 108953436 + NBPF5P
Exon structure

100507044 ENSG00000243967 neuroblastoma breakpoint family, member 5, pseudogene
33108926311 108963917 - SLC25A24P2
Exon structure

100422608 ENSG00000238118 SLC25A24 pseudogene 2
34108918421 109013624 + NBPF6
Exon structure
Hs.712226 653149 ENSG00000186086 neuroblastoma breakpoint family, member 6
35108963311 108975897 + LOC400768
Exon structure
Hs.12422 400768 ENSG00000224698 Uncharacterized LOC400768 (est)
36108976243 108976271 + PIR52482
Exon structure




37108978728 108978756 + PIR60644
Exon structure




38108989860 108989886 + PIR49735
Exon structure




39108993797 108993827 - GC01M108993



40109032703 109032732 - GC01M109032



41109033372 109033404 + GC01P109033



42109044980 109046077 + ST13P21
Exon structure

642818 ENSG00000227832 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 21
43109051196 109051865 + LOC100420170
Exon structure

100420170 ENSG00000226483
44108963180 109235146 - GC01M108965



45109102711 109187522 + FAM102B
Exon structure
Hs.200230 284611 ENSG00000162636 family with sequence similarity 102, member B
46109190910 109204148 - HENMT1
Exon structure
Hs.7962 113802 ENSG00000162639 HEN1 methyltransferase homolog 1 (Arabidopsis)
47109204133 109209159 + GC01P109204



48109210640 109210682 - GC01M109210



49109220235 109220262 + PIR52312
Exon structure




50109234932 109244425 + PRPF38B
Exon structure
Hs.342307 55119 ENSG00000134186 pre-mRNA processing factor 38B
51109240580 109240776 + GC01P109243



52109240322 109242007 + GC01P109244



53109255279 109285371 + FNDC7
Exon structure
Hs.258253 163479 ENSG00000143107 fibronectin type III domain containing 7
54109276878 109277347 - ENSG00000232971
Exon structure


ENSG00000232971
55109276878 109278894 - GC01M109277



56109287467 109288249 + GC01P109287



57109289296 109299627 + GC01P109290



58109305143 109310209 - LOC100271656
Exon structure

100271656 ENSG00000228076
59109309463 109310206 - GC01M109310



60109289285 109352148 + STXBP3
Exon structure
Hs.530436 6814 ENSG00000116266 syntaxin binding protein 3
61109324483 109336253 + GC01P109324



62109338857 109350103 + GC01P109341



63109358520 109363200 - GC01M109365



64109399839 109401146 + SPATA42
Exon structure
Hs.372658 642864 ENSG00000203897 spermatogenesis associated 42 (non-protein coding)
65109358520 109506106 - AKNAD1
Exon structure
Hs.729441 254268 ENSG00000162641 AKNA domain containing 1
66109417972 109477167 + GPSM2
Exon structure
Hs.584901 29899 ENSG00000121957 G-protein signaling modulator 2
67109472561 109486504 - GC01M109473



68109472130 109506111 - CLCC1
Exon structure
Hs.658489 23155 ENSG00000121940 chloride channel CLIC-like 1
69109510152 109510193 + PIR54977
Exon structure




70109529585 109529867 - ENSG00000237349
Exon structure


ENSG00000237349
71109534858 109535493 + RPL17P7
Exon structure

100132742 ENSG00000244716 ribosomal protein L17 pseudogene 7
72109512836 109584850 - WDR47
Exon structure
Hs.570055 22911 ENSG00000085433 WD repeat domain 47
73109572689 109572941 + GC01P109574



74109572654 109572998 + RPS27P6
Exon structure

100132488 ENSG00000228665 ribosomal protein S27 pseudogene 6
75109475148 109695594 + GC01P109478



76109589436 109590104 + RANP5
Exon structure

100129428 ENSG00000228054 RAN, member RAS oncogene family pseudogene 5
77109605108 109618624 - TAF13
Exon structure
Hs.632426 6884 ENSG00000197780 TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa
78109621258 109627542 - GC01M109621



79109630593 109633480 - ENSG00000273382
Exon structure


ENSG00000273382
80109635089 109635662 - NDUFB3P1
Exon structure

93993
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa pseudogene 1
81109632425 109639556 + TMEM167B
Exon structure
Hs.82933 56900 ENSG00000215717 transmembrane protein 167B
82109642814 109643236 + GC01P109645



83109642815 109643241 + SCARNA2
Exon structure
Hs.550815 677766 ENSG00000270066 small Cajal body-specific RNA 2
84109642742 109646657 + GC01P109646



85109646068 109647398 - LOC100420092
Exon structure

100420092 ENSG00000251484
86109648573 109656479 - C1orf194
Exon structure
Hs.446962 127003 ENSG00000179902 chromosome 1 open reading frame 194
87109648673 109656457 - GC01M109650



88109656301 109749403 + KIAA1324
Exon structure
Hs.708190 57535 ENSG00000116299 KIAA1324
89109704228 109707248 + GC01P109707



90109733994 109735283 + GC01P109733



91109740229 109742707 + GC01P109751



92109740229 109742707 + GC01P109763



93109740229 109742707 + GC01P109753



94109750415 109750465 - GC01M109755



95109750416 109750470 - RNU7-122P
Exon structure

hugo3408 ENSG00000238310 RNA, U7 small nuclear 122 pseudogene
96109754802 109756393 + GC01P109764



97109756515 109780804 + SARS
Exon structure
Hs.531176 6301 ENSG00000031698 seryl-tRNA synthetase
98109772075 109772101 + PIR56087
Exon structure




99109801451 109801477 + PIR46363
Exon structure




100109792641 109818378 + CELSR2
Exon structure
Hs.57652 1952 ENSG00000143126 cadherin, EGF LAG seven-pass G-type receptor 2
101109822176 109825808 - PSRC1
Exon structure
Hs.405925 84722 ENSG00000134222 proline/serine-rich coiled-coil 1
102109834987 109849663 - MYBPHL
Exon structure
Hs.443402 343263 ENSG00000221986 myosin binding protein H-like
103109835137 109849617 - GC01M109835



104109855953 109856061 + GC01P109862



105109852187 109940573 - SORT1
Exon structure
Hs.485195 6272 ENSG00000134243 sortilin 1
106109897107 109940483 - GC01M109898



107109941664 109943691 - GC01M109945



108109954492 109954907 - GC01M109955



109109941653 109969108 - PSMA5
Exon structure
Hs.485246 5686 ENSG00000143106 proteasome (prosome, macropain) subunit, alpha type, 5
110109957431 109957987 - GC01M109957



111109965123 109968162 + GC01P109970



112110009100 110024764 + SYPL2
Exon structure
Hs.528366 284612 ENSG00000143028 synaptophysin-like 2
113110017864 110019465 + GC01P110017



114110029812 110029839 + PIR41243
Exon structure




115110026101 110035426 + ATXN7L2
Exon structure
Hs.118248 127002 ENSG00000162650 ataxin 7-like 2
116110031962 110033581 + GC01P110032



117110035318 110035337 + GC01P110035



118110036658 110045554 + CYB561D1
Exon structure
Hs.514682 284613 ENSG00000174151 cytochrome b561 family, member D1
119110049404 110049434 - PIR48461
Exon structure




120110049404 110049434 - GC01M110052



121110046797 110052360 - AMIGO1
Exon structure
Hs.726479 57463 ENSG00000181754 adhesion molecule with Ig-like domain 1
122110051088 110051117 - PIR54880
Exon structure




123110082550 110085498 + GC01P110083



124110082528 110086459 - ENSG00000254942
Exon structure


ENSG00000254942
125110082494 110091028 + GPR61
Exon structure
Hs.709782 83873 ENSG00000156097 G protein-coupled receptor 61
126110087933 110089881 + GC01P110087



127110088457 110091185 - GC01M110088



128110091186 110138452 + GNAI3
Exon structure
Hs.73799 2773 ENSG00000065135 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
129110133927 110134262 - RNU6V
Exon structure

6071 ENSG00000206832 RNA, U6 small nuclear variant sequence with SNRPE pseudogene sequence
130110134154 110134262 - GC01M110144



131110134155 110134262 - GC01M110143



132110138847 110140403 + ENSG00000225113
Exon structure


ENSG00000225113
133110141515 110141589 + MIR197
Exon structure

406974 ENSG00000207709 microRNA 197
134110145889 110155705 - GNAT2
Exon structure
Hs.36973 2780 ENSG00000134183 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2
135110158726 110174677 + AMPD2
Exon structure
Hs.82927 271 ENSG00000116337 adenosine monophosphate deaminase 2
136110169545 110170477 + GC01P110170



137110171039 110172927 - ENSG00000228703
Exon structure


ENSG00000228703
138110173617 110173647 + GC01P110175



139110173617 110173647 + PIR40697
Exon structure




140110193985 110194721 + RPL7P8
Exon structure

441896 ENSG00000235045 ribosomal protein L7 pseudogene 8
141110198698 110208123 + GSTM4
Exon structure
Hs.348387 2948 ENSG00000168765 glutathione S-transferase mu 4
142110210679 110211470 + GC01P110211



143110227039 110227070 + GC01P110228



144110227451 110227486 + GC01P110227



145110210644 110252171 + GSTM2
Exon structure
Hs.279837 2946 ENSG00000213366 glutathione S-transferase mu 2 (muscle)
146110235739 110236364 - ENSG00000260246
Exon structure


ENSG00000260246
147110230418 110251661 + GSTM1
Exon structure
Hs.301961 2944 ENSG00000134184 glutathione S-transferase mu 1
148110245484 110245515 + GC01P110245



149110247853 110252173 + GC01P110247



150110276554 110284384 - GSTM3
Exon structure
Hs.2006 2947 ENSG00000134202 glutathione S-transferase mu 3 (brain)
151110254864 110318050 + GSTM5
Exon structure
Hs.75652 2949 ENSG00000134201 glutathione S-transferase mu 5
152110268442 110317874 + ENSG00000241720
Exon structure


ENSG00000241720
153110292978 110294562 - GC01M110293



154110292702 110306649 - EPS8L3
Exon structure
Hs.485352 79574 ENSG00000198758 EPS8-like 3
155110300977 110306539 - GC01M110300



156110322018 110327958 + GC01P110324



157110330901 110330928 + PIR57260
Exon structure




158110353264 110353620 - ENSG00000224927
Exon structure


ENSG00000224927
159110377752 110377778 + PIR41409
Exon structure




160110379830 110379860 + GC01P110379



161110370977 110414058 + ENSG00000228420
Exon structure


ENSG00000228420
162110426798 110428886 - ENSG00000235005
Exon structure


ENSG00000235005
163110438595 110440483 + ENSG00000261055
Exon structure


ENSG00000261055
164110452864 110473614 + CSF1
Exon structure
Hs.173894 1435 ENSG00000184371 colony stimulating factor 1 (macrophage)
165110464741 110464845 + GC01P110468



166110524639 110524667 - PIR51421
Exon structure




167110528109 110564530 + GC01P110533



168110527308 110566364 + AHCYL1
Exon structure
Hs.743973 10768 ENSG00000168710 adenosylhomocysteinase-like 1
169110561054 110561712 + GC01P110587



170110561159 110561857 + GC01P110585



171110559335 110565014 + GC01P110580



172110560117 110564667 + GC01P110589



173110561401 110563396 + GC01P110581



174110560144 110565014 + GC01P110582



175110563402 110566333 + GC01P110584



176110577248 110580866 + GC01P110586



177110581716 110582339 + GC01P110588



178110590195 110590926 + GC01P110590



179110574199 110617263 + STRIP1
Exon structure
Hs.584996 85369 ENSG00000143093 striatin interacting protein 1
180110600097 110600124 + PIR42532
Exon structure




181110600360 110600391 + PIR37578
Exon structure




182110600360 110600391 + GC01P110635



183110600551 110600580 + PIR40904
Exon structure




184110600772 110600800 + PIR39123
Exon structure




185110602642 110602670 - PIR45646
Exon structure




186110600962 110605177 + ENSG00000258634
Exon structure


ENSG00000258634
187110603303 110603332 + PIR49708
Exon structure




188110603335 110603368 + PIR35966
Exon structure




189110607283 110607314 - GC01M110607



190110602616 110613322 - ALX3
Exon structure
Hs.669953 257 ENSG00000156150 ALX homeobox 3
191110625310 110652341 + ENSG00000258673
Exon structure


ENSG00000258673
192110624852 110652861 + GC01P110630



193110655062 110656569 + UBL4B
Exon structure
Hs.374027 164153 ENSG00000186150 ubiquitin-like 4B
194110708808 110709805 - GC01M110711



195110708808 110715111 - ENSG00000227091
Exon structure


ENSG00000227091
196110715057 110715083 + PIR31985
Exon structure




197110693108 110744824 + SLC6A17
Exon structure
Hs.128382 388662 ENSG00000197106 solute carrier family 6 (neutral amino acid transporter), member 17
198110720265 110721341 - ENSG00000235526
Exon structure


ENSG00000235526
199110735190 110737610 + GC01P110736



200110751213 110752568 - GC01M110753



201110751456 110752609 - KCNC4-AS1
Exon structure

100873974 ENSG00000224965 KCNC4 antisense RNA 1 (head to head)
202110772526 110774042 + LOC100506257
Exon structure
Hs.730074 100506257
Uncharacterized LOC100506257 (est)
203110753336 110825722 + KCNC4
Exon structure
Hs.153521 3749 ENSG00000116396 potassium voltage-gated channel, Shaw-related subfamily, member 4
204110815105 110815229 + GC01P110818



205110815106 110815229 + ENSG00000200536
Exon structure


ENSG00000200536
206110828997 110881793 - RP5-1074L1.1
Exon structure
Hs.649375 440600 ENSG00000227963 Uncharacterized LOC440600 (est)
207110856618 110857022 - GC01M110857



208110880023 110880617 + GC01P110885



209110881652 110881679 + PIR47446
Exon structure




210110881128 110889303 + RBM15
Exon structure
Hs.435947 64783 ENSG00000162775 RNA binding motif protein 15
211110889937 110898896 + GC01P110889



212110912776 110915625 + ENSG00000273373
Exon structure


ENSG00000273373
213110905470 110933704 - SLC16A4
Exon structure
Hs.351306 9122 ENSG00000168679 solute carrier family 16, member 4
214110943871 110950564 - LAMTOR5
Exon structure
Hs.439815 10542 ENSG00000134248 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5
215110925441 110974982 + LAMTOR5-AS1
Exon structure

101410535 ENSG00000224699 LAMTOR5 antisense RNA 1
216110962457 110962484 + PIR32779
Exon structure




217110963026 110963385 - GC01M110963



218110993788 110999976 + PROK1
Exon structure
Hs.514793 84432 ENSG00000143125 prokineticin 1
219110999127 110999976 - ENSG00000270380
Exon structure


ENSG00000270380
220111015237 111016259 - GC01M111016



221111016378 111031285 + GC01P111018



222111023374 111033899 + CYMP
Exon structure
Hs.532720 643160 ENSG00000240194 chymosin pseudogene
223111030302 111032880 - LOC440602
Exon structure
Hs.708945 440602 ENSG00000235407 Uncharacterized LOC440602 (est)
224111059839 111061797 - KCNA10
Exon structure
Hs.248140 3744 ENSG00000143105 potassium voltage-gated channel, shaker-related subfamily, member 10
225111059839 111061797 + GC01P111062



226111146618 111148986 - GC01M111150



227111136202 111174096 - KCNA2
Exon structure
Hs.248139; Hs.657199 3737 ENSG00000177301 potassium voltage-gated channel, shaker-related subfamily, member 2
228111195564 111195653 - ENSG00000221538
Exon structure


ENSG00000221538
229111196182 111199662 - ENSG00000259834
Exon structure


ENSG00000259834
230111201921 111212440 - GC01M111203



231111214310 111217655 - KCNA3
Exon structure
Hs.169948 3738 ENSG00000177272 potassium voltage-gated channel, shaker-related subfamily, member 3
232111215985 111216099 - GC01M111220



233111215985 111216099 - GC01M111221



234111220024 111224633 + GC01P111220



235111000659 111484975 - GC01M111003



236111264769 111265091 + GC01P111264



237111307030 111307128 - ENSG00000199710
Exon structure


ENSG00000199710
238111307031 111307128 - GC01M111310



239111390195 111391694 - NRBF2P3
Exon structure

643232 ENSG00000237415 nuclear receptor binding factor 2 pseudogene 3
240111396561 111397511 + OR11I1P
Exon structure

81479 ENSG00000232791 olfactory receptor, family 11, subfamily I, member 1 pseudogene
241111413821 111442558 + CD53
Exon structure
Hs.443057 963 ENSG00000143119 CD53 molecule
242111436931 111442473 + GC01P111436



243111478991 111484975 - ENSG00000261654
Exon structure


ENSG00000261654
244111486089 111495470 + ENSG00000232811
Exon structure


ENSG00000232811
245111489807 111506701 - LRIF1
Exon structure
Hs.25245 55791 ENSG00000121931 ligand dependent nuclear receptor interacting factor 1
246111505924 111507271 + ENSG00000273010
Exon structure


ENSG00000273010
247111550315 111558152 - CCNT2P1
Exon structure

100418763 ENSG00000225672 cyclin T2 pseudogene 1
248111584456 111584547 + RNA5SP54
Exon structure

100873292 ENSG00000252760 RNA, 5S ribosomal pseudogene 54
249111660885 111660902 + GC01P111661



250111659954 111682838 - DRAM2
Exon structure
Hs.485606 128338 ENSG00000156171 DNA-damage regulated autophagy modulator 2
251111660746 111682736 - GC01M111660



252111682249 111727724 + CEPT1
Exon structure
Hs.363572 10390 ENSG00000134255 choline/ethanolamine phosphotransferase 1
253111723996 111724113 - ENSG00000272982
Exon structure


ENSG00000272982
254111727037 111727683 - ENSG00000273221
Exon structure


ENSG00000273221
255111729796 111747157 - DENND2D
Exon structure
Hs.557850 79961 ENSG00000162777 DENN/MADD domain containing 2D
256111739711 111739738 - PIR46223
Exon structure




257111743393 111786062 + CHI3L2
Exon structure
Hs.514840 1117 ENSG00000064886 chitinase 3-like 2
258111781928 111786060 + GC01P111782



259111792876 111799338 + CHIAP1
Exon structure

100420342 ENSG00000236040 chitinase, acidic pseudogene 1
260111822681 111828738 + CHIAP2
Exon structure
Hs.736960 149620 ENSG00000203878 chitinase, acidic pseudogene 2
261111833484 111863188 + CHIA
Exon structure
Hs.128814 27159 ENSG00000134216 chitinase, acidic
262111860222 111866603 - ENSG00000229283
Exon structure


ENSG00000229283
263111866455 111866697 + ENSG00000232240
Exon structure


ENSG00000232240
264111888910 111895639 + PIFO
Exon structure
Hs.172510 128344 ENSG00000173947 primary cilia formation
265111895897 111910031 - CHIAP3
Exon structure

100996315 ENSG00000234020 chitinase, acidic pseudogene 3
266111917924 111923194 + HIGD1AP12
Exon structure

100130383 ENSG00000236012 HIG1 hypoxia inducible domain family, member 1A pseudogene 12
267111922913 111923193 + GC01P111923



268111925482 111934441 - PGCP1
Exon structure
Hs.568387 441897 ENSG00000227179 progastricsin (pepsinogen C) pseudogene 1
269111956742 111957965 + GC01P111956



270111957842 111959301 - GC01M111957



271111956936 111970399 - OVGP1
Exon structure
Hs.1154 5016 ENSG00000085465 oviductal glycoprotein 1, 120kDa
272111962232 111965673 - GC01M111962



273111973668 111975690 - ENSG00000260948
Exon structure


ENSG00000260948
274111980136 111980659 + UBE2FP3
Exon structure

hugo3604 ENSG00000233337 ubiquitin-conjugating enzyme E2F (putative) pseudogene 3
275111981260 111983986 - ENSG00000243960
Exon structure


ENSG00000243960
276111982512 111991998 - WDR77
Exon structure
Hs.204773 79084 ENSG00000116455 WD repeat domain 77
277111989419 111989528 + GC01P111998



278111989420 111989530 + ENSG00000199890
Exon structure


ENSG00000199890
279111990113 111990142 - PIR44385
Exon structure




280111992093 111992169 + GC01P111999



281111992093 111992169 + GC01P112000



282111991486 112005395 + ATP5F1
Exon structure
Hs.514870 515 ENSG00000116459 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
283112004684 112012086 - GC01M112007



284112016414 112021134 + C1orf162
Exon structure
Hs.288010 128346 ENSG00000143110 chromosome 1 open reading frame 162
285112027937 112031446 - GC01M112027



286112032938 112033045 - GC01M112036



287112032939 112033045 - ENSG00000200360
Exon structure


ENSG00000200360
288112043132 112045709 - GC01M112043



289112025970 112106597 - ADORA3
Exon structure
Hs.281342 140 ENSG00000121933 adenosine A3 receptor
290112141629 112151345 - LINC01160
Exon structure
Hs.689728 100129269 ENSG00000231346 long intergenic non-protein coding RNA 1160
291112151004 112151036 - GC01M112151



292112151454 112151486 + GC01P112151



293112084840 112259313 + RAP1A
Exon structure
Hs.190334 5906 ENSG00000116473 RAP1A, member of RAS oncogene family