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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 1

   GeneLoc map region (31,327,869 - 35,338,083 bp) around gene/marker "FNDC5"

   Explanation:
   FNDC5 is located at 33,327,869-33,338,083 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
131331005 31333101 + LOC400748
Exon structure
Hs.639254 400748 ENSG00000235143 Uncharacterized LOC400748 (est)
231333698 31334455 + GC01P031337



331342423 31343866 + GC01P031342



431351523 31353616 - GC01M031351



531342313 31381608 - SDC3
Exon structure
Hs.158287 9672 ENSG00000162512 syndecan 3
631408532 31408623 - GC01M031420



731408535 31408623 - SNORD103A
Exon structure

692234 ENSG00000200154 small nucleolar RNA, C/D box 103A
831408588 31408618 - GC01M031419



931408588 31408618 - PIR48625
Exon structure




1031408588 31408618 - GC01M031418



1131421961 31422052 - GC01M031423



1231421964 31422052 - SNORD103B
Exon structure

692235 ENSG00000202107 small nucleolar RNA, C/D box 103B
1331422017 31422047 - GC01M031422



1431441012 31441042 - GC01M031449



1531441012 31441042 - PIR59757
Exon structure




1631441010 31441084 - SNORD85
Exon structure

692200 ENSG00000200181 small nucleolar RNA, C/D box 85
1731441009 31441084 - GC01M031450



1831437735 31454992 - GC01M031437



1931460912 31461481 + PRO0611
Exon structure

28997

2031404353 31538838 - PUM1
Exon structure
Hs.281707 9698 ENSG00000134644 pumilio RNA-binding family member 1
2131497528 31497545 - GC01M031497



2231509581 31510087 + ENSG00000237329
Exon structure


ENSG00000237329
2331501605 31538542 - GC01M031501



2431523719 31523881 + ENSG00000232768
Exon structure


ENSG00000232768
2531567418 31568485 - SEPW1P
Exon structure

23679 ENSG00000215900 selenoprotein W, 1 pseudogene
2631567834 31568405 - GC01M031568



2731580948 31581510 - RPL21P22
Exon structure

100270878 ENSG00000225142 ribosomal protein L21 pseudogene 22
2831581035 31581470 - GC01M031582



2931649084 31649112 + GC01P031650



3031649123 31649154 + GC01P031649



3131650227 31650263 + GC01P031651



3231653387 31654523 - GC01M031653



3331652592 31712734 - NKAIN1
Exon structure
Hs.470259 79570 ENSG00000084628 Na+/K+ transporting ATPase interacting 1
3431732520 31734669 - GC01M031734



3531736092 31736528 - ENSG00000229447
Exon structure


ENSG00000229447
3631732415 31769662 - SNRNP40
Exon structure
Hs.33962 9410 ENSG00000060688 small nuclear ribonucleoprotein 40kDa (U5)
3731765691 31769629 - GC01M031767



3831769894 31811808 + GC01P031770



3931769842 31837783 + ZCCHC17
Exon structure
Hs.524094 51538 ENSG00000121766 zinc finger, CCHC domain containing 17
4031805914 31819646 - ENSG00000229044
Exon structure


ENSG00000229044
4131838100 31849697 - FABP3
Exon structure
Hs.657242 2170 ENSG00000121769 fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)
4231849909 31850331 - GC01M031852



4331882412 31907527 + SERINC2
Exon structure
Hs.270655 347735 ENSG00000168528 serine incorporator 2
4431902192 31902614 - ENSG00000268950
Exon structure


ENSG00000268950
4531917032 31922302 + GC01P031920



4631933168 31944351 - GC01M031936



4731960436 31961820 - LOC441880
Exon structure

441880 ENSG00000215899
4831967628 31967925 - GC01M031978



4931970419 31970525 - RNU6-40P
Exon structure

hugo2727 ENSG00000206981 RNA, U6 small nuclear 40, pseudogene
5031970418 31970525 - GC01M031976



5131971267 31974167 + LINC01225
Exon structure
Hs.729905 149086 ENSG00000228682 long intergenic non-protein coding RNA 1225
5231975779 31976139 + GC01P031975



5331984036 31989846 + GC01P031988



5431984036 31989846 + LINC01226
Exon structure
Hs.658659 284551 ENSG00000223907 long intergenic non-protein coding RNA 1226
5532037186 32041174 - ENSG00000229167
Exon structure


ENSG00000229167
5632042136 32050941 + GC01P032043



5732042086 32053288 + TINAGL1
Exon structure
Hs.199368 64129 ENSG00000142910 tubulointerstitial nephritis antigen-like 1
5832083287 32098119 + HCRTR1
Exon structure
Hs.388226 3061 ENSG00000121764 hypocretin (orexin) receptor 1
5932095463 32110838 - PEF1
Exon structure
Hs.470417 553115 ENSG00000162517 penta-EF-hand domain containing 1
6032098760 32110202 - GC01M032098



6132110295 32114972 + ENSG00000264078
Exon structure


ENSG00000264078
6232109650 32125539 + ENSG00000235790
Exon structure


ENSG00000235790
6332118112 32138827 - GC01M032118



6432135745 32136600 + GC01P032135



6532117848 32169920 - COL16A1
Exon structure
Hs.368921 1307 ENSG00000084636 collagen, type XVI, alpha 1
6632149309 32155569 - GC01M032149



6732164091 32169661 - GC01M032164



6832203801 32204811 - GC01M032203



6932207709 32209274 - GC01M032207



7032192718 32230494 - BAI2
Exon structure
Hs.524138 576 ENSG00000121753 brain-specific angiogenesis inhibitor 2
7132224261 32224336 - MIR4254
Exon structure

100423028 ENSG00000266580 microRNA 4254
7232254731 32256923 + ENSG00000254545
Exon structure


ENSG00000254545
7332259335 32259366 - GC01M032262



7432259335 32259366 - PIR43779
Exon structure




7532256023 32281652 - SPOCD1
Exon structure
Hs.62604 90853 ENSG00000134668 SPOC domain containing 1
7632307620 32321169 - ENSG00000203620
Exon structure


ENSG00000203620
7732317514 32387442 - ENSG00000269967
Exon structure


ENSG00000269967
7832372022 32373712 - GC01M032376



7932374254 32376881 - GC01M032378



8032377001 32377018 - GC01M032377



8132379174 32380745 + ENSG00000212673
Exon structure


ENSG00000212673
8232372022 32410457 - PTP4A2
Exon structure
Hs.470477 8073 ENSG00000184007 protein tyrosine phosphatase type IVA, member 2
8332398621 32399576 + ENSG00000228634
Exon structure


ENSG00000228634
8432479430 32526451 + KHDRBS1
Exon structure
Hs.445893 10657 ENSG00000121774 KH domain containing, RNA binding, signal transduction associated 1
8532510924 32511014 + GC01P032516



8632510932 32526453 + GC01P032517



8732517892 32539075 - ENSG00000203325
Exon structure


ENSG00000203325
8832541351 32541380 + PIR59537
Exon structure




8932552550 32552608 + MIR5585
Exon structure

100847018 ENSG00000266203 microRNA 5585
9032537632 32568467 + TMEM39B
Exon structure
Hs.25544 55116 ENSG00000121775 transmembrane protein 39B
9132573639 32642169 + KPNA6
Exon structure
Hs.470588 23633 ENSG00000025800 karyopherin alpha 6 (importin alpha 7)
9232625001 32625027 + PIR55954
Exon structure




9332637808 32637834 + PIR38742
Exon structure




9432637945 32637973 + PIR39249
Exon structure




9532636334 32642169 + ENSG00000250135
Exon structure


ENSG00000250135
9632645916 32661406 + GC01P032653



9732645918 32661406 + GC01P032654



9832645287 32663886 + TXLNA
Exon structure
Hs.17987 200081 ENSG00000084652 taxilin alpha
9932658802 32665958 - GC01M032658



10032665987 32670991 + CCDC28B
Exon structure
Hs.534482 79140 ENSG00000160050 coiled-coil domain containing 28B
10132667297 32670815 + GC01P032667



10232670370 32672415 - ENSG00000224066
Exon structure


ENSG00000224066
10332671788 32671814 + PIR35641
Exon structure




10432668925 32675448 - GC01M032668



10532671236 32674288 + IQCC
Exon structure
Hs.274356 55721 ENSG00000160051 IQ motif containing C
10632674695 32681797 + DCDC2B
Exon structure
Hs.424588 149069 ENSG00000222046 doublecortin domain containing 2B
10732680073 32687972 - TMEM234
Exon structure
Hs.272299 56063 ENSG00000160055 transmembrane protein 234
10832689690 32689717 + PIR61377
Exon structure




10932688008 32692073 + GC01P032688



11032687529 32697205 + EIF3I
Exon structure
Hs.530096 8668 ENSG00000084623 eukaryotic translation initiation factor 3, subunit I
11132694780 32694806 + PIR35466
Exon structure




11232697259 32707311 - MTMR9LP
Exon structure
Hs.471067 339483 ENSG00000220785 myotubularin related protein 9-like, pseudogene
11332705835 32708623 + GC01P032710



11432712818 32714461 + FAM167B
Exon structure
Hs.18449 84734 ENSG00000183615 family with sequence similarity 167, member B
11532716840 32751766 + LCK
Exon structure
Hs.470627 3932 ENSG00000182866 lymphocyte-specific protein tyrosine kinase
11632752053 32752162 - ENSG00000252450
Exon structure


ENSG00000252450
11732757687 32799236 + HDAC1
Exon structure
Hs.88556 3065 ENSG00000116478 histone deacetylase 1
11832786799 32788162 - GC01M032788



11932795750 32796476 + GC01P032795



12032797137 32798680 + GC01P032797



12132799433 32801980 - MARCKSL1
Exon structure
Hs.75061 65108 ENSG00000175130 MARCKS-like 1
12232813111 32814381 + GC01P032813



12332814795 32816264 - ENSG00000233775
Exon structure


ENSG00000233775
12432817122 32829926 + TSSK3
Exon structure
Hs.512763 81629 ENSG00000162526 testis-specific serine kinase 3
12532826871 32829879 - FAM229A
Exon structure
Hs.660539 100128071 ENSG00000225828 family with sequence similarity 229, member A
12632831372 32831699 + GC01P032837



12732833626 32840383 - GC01M032835



12832830704 32860332 - BSDC1
Exon structure
Hs.353454 55108 ENSG00000160058 BSD domain containing 1
12932859202 32860026 - GC01M032859



13032867501 32868784 - GAPDHP20
Exon structure

343338 ENSG00000224333 glyceraldehyde 3 phosphate dehydrogenase pseudogene 20
13132887580 32887920 + ENSG00000270850
Exon structure


ENSG00000270850
13232888815 32892390 - LRRC37A12P
Exon structure

hugo392 ENSG00000229259 leucine rich repeat containing 37, member A12, pseudogene
13332923435 32923733 + GC01P032936



13432923436 32923733 + RN7SL122P
Exon structure

hugo871 ENSG00000263529 RNA, 7SL, cytoplasmic 122, pseudogene
13532930658 32962287 + ZBTB8B
Exon structure
Hs.647658 728116 ENSG00000273274 zinc finger and BTB domain containing 8B
13632930658 33066393 + ENSG00000254553
Exon structure


ENSG00000254553
13733004772 33071542 + ZBTB8A
Exon structure
Hs.546479 653121 ENSG00000160062 zinc finger and BTB domain containing 8A
13833090268 33090299 - GC01M033090



13933065773 33116504 - ZBTB8OS
Exon structure
Hs.655921 339487 ENSG00000176261 zinc finger and BTB domain containing 8 opposite strand
14033105551 33105651 + GC01P033108



14133105552 33105653 + ENSG00000200591
Exon structure


ENSG00000200591
14233099644 33116185 - GC01M033104



14333116815 33134857 + GC01P033117



14433116743 33151812 + RBBP4
Exon structure
Hs.16003 5928 ENSG00000162521 retinoblastoma binding protein 4
14533148961 33151810 + GC01P033153



14633145507 33169197 - SYNC
Exon structure
Hs.712631 81493 ENSG00000162520 syncoilin, intermediate filament protein
14733171296 33171923 - GC01M033177



14833183335 33190838 - ENSG00000224409
Exon structure


ENSG00000224409
14933207486 33240571 + KIAA1522
Exon structure
Hs.591502 57648 ENSG00000162522 KIAA1522
15033240845 33246312 - GC01M033241



15133252541 33263815 - GC01M033252



15233240840 33283754 - YARS
Exon structure
Hs.213264 8565 ENSG00000134684 tyrosyl-tRNA synthetase
15333269603 33269639 - GC01M033269



15433270395 33270423 - GC01M033270



15533276332 33277248 - GC01M033276



15633283257 33284436 + GC01P033284



15733282368 33324476 + S100PBP
Exon structure
Hs.440880 64766 ENSG00000116497 S100P binding protein
15833312403 33321786 + GC01P033312



15933322765 33322794 + PIR61390
Exon structure




16033322765 33322794 + GC01P033325



16133327869 33330320 - GC01M033328



16233327869 33338083 - FNDC5
Exon structure
Hs.524234 252995 ENSG00000160097 fibronectin type III domain containing 5
16333352082 33354523 + GC01P033360



16433352082 33354523 + GC01P033359



16533351595 33364042 + HPCA
Exon structure
Hs.632391 3208 ENSG00000121905 hippocalcin
16633359125 33364042 + GC01P033361



16733360195 33367039 - TMEM54
Exon structure
Hs.534521 113452 ENSG00000121900 transmembrane protein 54
16833376124 33376150 + PIR42811
Exon structure




16933389756 33389786 - GC01M033390



17033389766 33389795 - GC01M033389



17133391895 33392000 + ENSG00000221423
Exon structure


ENSG00000221423
17233394669 33399878 + GC01P033397



17333402046 33430286 - RNF19B
Exon structure
Hs.591504 127544 ENSG00000116514 ring finger protein 19B
17433430676 33431256 + GC01P033433



17533439327 33439370 - GC01M033444



17633439268 33439642 + ENSG00000267885
Exon structure


ENSG00000267885
17733440922 33440954 - GC01M033440



17833441002 33441030 - GC01M033443



17933445511 33446125 + RPL18AP4
Exon structure

127545 ENSG00000217644 ribosomal protein L18a pseudogene 4
18033452532 33453848 + LOC100419257
Exon structure

100419257

18133452553 33453834 + ENSG00000239670
Exon structure


ENSG00000239670
18233452676 33498070 + ENSG00000236065
Exon structure


ENSG00000236065
18333476120 33478888 - GC01M033480



18433473541 33546597 - AK2
Exon structure
Hs.470907 204 ENSG00000004455 adenylate kinase 2
18533517008 33517037 + GC01P033521



18633517047 33517078 + GC01P033517



18733517317 33517346 + GC01P033519



18833518785 33518828 + GC01P033518



18933520073 33520100 + PIR48800
Exon structure




19033522200 33524483 + GC01P033522



19133546762 33557811 + GC01P033547



19233546705 33586131 + ADC
Exon structure
Hs.101807 113451 ENSG00000142920 arginine decarboxylase
19333589900 33592748 - GC01M033589



19433592954 33593583 + GC01P033592



19533593693 33597134 + GC01P033593



19633603694 33606476 - GC01M033603



19733607472 33608831 - GC01M033613



19833611003 33647671 - TRIM62
Exon structure
Hs.656006 55223 ENSG00000116525 tripartite motif containing 62
19933646856 33647660 - GC01M033646



20033665616 33665792 - GC01M033671



20133665616 33665792 - GC01M033672



20233722083 33722110 + PIR58191
Exon structure




20333722608 33722802 + GC01P033728



20433726813 33727281 + ENSG00000270115
Exon structure


ENSG00000270115
20533722146 33766320 + ZNF362
Exon structure
Hs.743358 149076 ENSG00000160094 zinc finger protein 362
20633750116 33750576 + GC01P033755



20733764975 33766320 + ENSG00000256142
Exon structure


ENSG00000256142
20833774624 33774667 - GC01M033774



20933775450 33775478 + PIR36261
Exon structure




21033775466 33775494 - GC01M033775



21133772367 33786699 - A3GALT2
Exon structure

127550 ENSG00000184389 alpha 1,3-galactosyltransferase 2
21233772967 33791644 + ENSG00000225313
Exon structure


ENSG00000225313
21333789226 33789621 - GC01M033806



21433789226 33789621 - GC01M033796



21533797994 33798093 - MIR3605
Exon structure

100500853 ENSG00000266239 microRNA 3605
21633802167 33802465 - RN7SKP16
Exon structure

hugo623 ENSG00000222112 RNA, 7SK small nuclear pseudogene 16
21733818814 33820504 - GC01M033818



21833822148 33822191 - GC01M033822



21933815953 33828846 + RP11-415J8.5
Exon structure

101929464 ENSG00000233246
22033789224 33896653 - PHC2
Exon structure
Hs.524271 1912 ENSG00000134686 polyhomeotic homolog 2 (Drosophila)
22133859089 33859527 + GC01P033862



22233832894 33896615 - GC01M033833



22333886393 33886946 + GC01P033889



22433907626 33907712 - ENSG00000221225
Exon structure


ENSG00000221225
22533931850 33934576 + TLR12P
Exon structure

100131451 ENSG00000234512 toll-like receptor 12, pseudogene
22633938232 33962107 + ZSCAN20
Exon structure
Hs.442705 7579 ENSG00000121903 zinc finger and SCAN domain containing 20
22733960566 33960734 + GC01P033963



22833968074 33968100 + PIR38616
Exon structure




22933974508 33974544 - GC01M033974



23033975266 33975297 - GC01M033975



23133975308 33975336 - GC01M033976



23233977491 33978384 - LOC100422287
Exon structure

100422287 ENSG00000235907
23333977608 33978343 - GC01M033978



23434258098 34285409 - GC01M034258



23534304122 34305741 + HSPD1P14
Exon structure

100287140 ENSG00000227000 heat shock 60kDa protein 1 (chaperonin) pseudogene 14
23633979609 34631443 - CSMD2
Exon structure
Hs.656915 114784 ENSG00000121904 CUB and Sushi multiple domains 2
23734326076 34330392 + HMGB4
Exon structure
Hs.568628 127540 ENSG00000176256 high mobility group box 4
23834327782 34329064 + GC01P034328



23934334554 34351059 + RP5-1007G16.1
Exon structure
Hs.666207 402779 ENSG00000231163 Uncharacterized LOC402779 (est)
24034548601 34548629 - GC01M034548



24134578550 34578664 + RNA5SP42
Exon structure

100873281 ENSG00000201148 RNA, 5S ribosomal pseudogene 42
24234578549 34578664 + GC01P034583



24334641467 34641550 - ENSG00000221053
Exon structure


ENSG00000221053
24434632484 34684732 + C1orf94
Exon structure
Hs.194610 84970 ENSG00000142698 chromosome 1 open reading frame 94
24534662884 34662916 + GC01P034664



24634662884 34662916 + PIR60480
Exon structure




24734742460 34742965 - LOC100420336
Exon structure

100420336 ENSG00000270241
24834753090 34759897 - GC01M034753



24934830406 34833852 + GC01P034833



25035081180 35083207 - GC01M035084



25135097925 35097957 + GC01P035097



25235135200 35135295 - MIR552
Exon structure

693137 ENSG00000207941 microRNA 552
25335158264 35158448 + GC01P035161



25435175644 35184060 - GC01M035175



25535220648 35224113 + GJB5
Exon structure
Hs.198249 2709 ENSG00000189280 gap junction protein, beta 5, 31.1kDa
25635225342 35229325 + GJB4
Exon structure
Hs.351203 127534 ENSG00000189433 gap junction protein, beta 4, 30.3kDa
25735227027 35253698 - ENSG00000255811
Exon structure


ENSG00000255811
25835244162 35244245 - ENSG00000216162
Exon structure


ENSG00000216162
25935246790 35251970 + GJB3
Exon structure
Hs.522561 2707 ENSG00000188910 gap junction protein, beta 3, 31kDa
26035178338 35325417 - SMIM12
Exon structure
Hs.27160; Hs.661594 113444 ENSG00000163866 small integral membrane protein 12
26135258599 35261348 + GJA4
Exon structure
Hs.296310 2701 ENSG00000187513 gap junction protein, alpha 4, 37kDa
26235301338 35301486 + GC01P035304



26335316295 35317156 + ENSG00000230163
Exon structure


ENSG00000230163
26435324803 35325900 + GC01P035332



26535331037 35395186 - DLGAP3
Exon structure
Hs.733945 58512 ENSG00000116544 discs, large (Drosophila) homolog-associated protein 3