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Display genomic neighborhood for:

gene
enhancer
genomic coordinates

   GeneLoc map region for Chromosome 13 (51,815,419 - 55,876,119 bp) around "LINC00558"


GenesEnhancers
#
#
 Location
Location
 Strand
Strand
Gene
Gene
 Enhancer ID
Enhancer ID
 Unigene cluster
Unigene cluster
 Entrez Gene Id
Entrez Gene Id
Ensembl Id
Ensembl Id
 Description
Description
1chr13: 51,816,601-51,816,800

GH13J051816



2chr13: 51,818,862-51,819,800

GH13J051818



3chr13: 51,820,688-51,828,126

GH13J051820



4chr13: 51,828,707-51,829,344

GH13J051828



5chr13: 51,832,401-51,832,826

GH13J051832



6chr13: 51,839,364-51,840,062

GH13J051839



7chr13: 51,844,745-51,845,787

GH13J051844



8chr13: 51,861,981-51,866,236 + CCDC70
Exon structure
Hs.120573 83446 ENSG00000123171 coiled-coil domain containing 70
9chr13: 51,891,086-52,012,125 - ATP7B
Exon structure
Hs.492280 540 ENSG00000123191 ATPase copper transporting beta
10chr13: 51,896,405-51,896,554

GH13J051896



11chr13: 51,906,665-51,906,814

GH13J051906



12chr13: 51,907,530-51,907,558 - PIR42261
Exon structure




13chr13: 51,907,820-51,910,621 - CTAGE3P
Exon structure
Hs.623891 220112 ENSG00000232872 CTAGE family member 3, pseudogene
14chr13: 51,920,825-51,920,974

GH13J051920



15chr13: 51,921,251-51,921,587 + ENSG00000279677
Exon structure


ENSG00000279677
16chr13: 51,941,826-51,942,769

GH13J051941



17chr13: 51,943,495-51,944,482

GH13J051943



18chr13: 51,954,772-51,956,474

GH13J051954



19chr13: 51,957,305-51,961,243

GH13J051957



20chr13: 51,963,734-51,964,064

GH13J051963



21chr13: 51,966,681-51,967,340 + FABP5P2
Exon structure

729163 ENSG00000236044 fatty acid binding protein 5 pseudogene 2
22chr13: 51,969,737-51,972,553

GH13J051969



23chr13: 51,975,385-51,975,608

GH13J051975



24chr13: 51,977,756-51,980,327

GH13J051977



25chr13: 51,981,054-51,982,114

GH13J051981



26chr13: 51,995,245-52,000,247

GH13J051995



27chr13: 52,001,285-52,001,394

GH13J052001



28chr13: 52,002,816-52,007,070

GH13J052002



29chr13: 52,009,849-52,013,635

GH13J052009



30chr13: 52,012,387-52,029,664 + ALG11
Exon structure
Hs.512963 440138 ENSG00000253710 ALG11, alpha-1,2-mannosyltransferase
31chr13: 52,022,485-52,022,634

GH13J052022



32chr13: 52,024,691-52,033,600 + UTP14C
Exon structure

9724 ENSG00000253797 UTP14C, small subunit processome component
33chr13: 52,028,325-52,028,384

GH13J052028



34chr13: 52,029,098-52,029,157

GH13J052030



35chr13: 52,029,602-52,029,661

GH13J052029



36chr13: 52,029,903-52,029,934 + PIR48020
Exon structure




37chr13: 52,029,903-52,029,934 + GC13P052032




38chr13: 52,033,611-52,130,366 - NEK5
Exon structure
Hs.672144 341676 ENSG00000197168 NIMA related kinase 5
39chr13: 52,061,665-52,061,814

GH13J052061



40chr13: 52,070,801-52,071,201

GH13J052070



41chr13: 52,085,109-52,085,983

GH13J052085



42chr13: 52,087,642-52,088,266

GH13J052087



43chr13: 52,108,635-52,110,054

GH13J052108



44chr13: 52,127,505-52,129,603

GH13J052127



45chr13: 52,128,891-52,132,723 + LOC101929657
Exon structure

101929657 ENSG00000273523
46chr13: 52,132,639-52,159,861 - NEK3
Exon structure
Hs.409989 4752 ENSG00000136098 NIMA related kinase 3
47chr13: 52,158,348-52,163,695

GH13J052158



48chr13: 52,166,613-52,168,594

GH13J052166



49chr13: 52,167,709-52,291,557 - ENSG00000217576
Exon structure


ENSG00000217576
50chr13: 52,167,709-52,194,467 - MRPS31P5
Exon structure
Hs.553878 100887750 ENSG00000243406 mitochondrial ribosomal protein S31 pseudogene 5
51chr13: 52,167,719-52,168,321 - THSD1P1
Exon structure

374500
thrombospondin type 1 domain containing 1 pseudogene 1
52chr13: 52,167,954-52,168,321 - ENSG00000285160
Exon structure


ENSG00000285160
53chr13: 52,169,090-52,169,118 - PIR59389
Exon structure




54chr13: 52,169,987-52,171,248 - ENSG00000285323
Exon structure


ENSG00000285323
55chr13: 52,170,677-52,171,728

GH13J052170



56chr13: 52,174,001-52,174,367

GH13J052174



57chr13: 52,181,099-52,182,296

GH13J052181



58chr13: 52,186,866-52,189,207

GH13J052186



59chr13: 52,191,218-52,192,537

GH13J052191



60chr13: 52,193,319-52,196,000

GH13J052193



61chr13: 52,201,486-52,201,800

GH13J052201



62chr13: 52,203,801-52,204,795

GH13J052203



63chr13: 52,210,735-52,212,092

GH13J052210



64chr13: 52,219,334-52,334,284 - TPTE2P2
Exon structure
Hs.678973 644623 ENSG00000272281 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 2
65chr13: 52,227,001-52,227,028 - PIR51896
Exon structure




66chr13: 52,235,801-52,236,595

GH13J052235



67chr13: 52,301,412-52,302,686

GH13J052301



68chr13: 52,334,295-52,341,896 + LINC02333
Exon structure

103191607 ENSG00000271564 long intergenic non-protein coding RNA 2333
69chr13: 52,343,517-52,345,932

GH13J052343



70chr13: 52,344,619-52,346,942 - LOC105370207
Exon structure

105370207

71chr13: 52,347,170-52,350,173

GH13J052347



72chr13: 52,358,859-52,360,644

GH13J052358



73chr13: 52,365,801-52,367,380

GH13J052365



74chr13: 52,371,547-52,372,650

GH13J052371



75chr13: 52,377,167-52,406,494 - THSD1
Exon structure
Hs.325667 55901 ENSG00000136114 thrombospondin type 1 domain containing 1
76chr13: 52,400,003-52,400,097 + GC13P052401




77chr13: 52,400,004-52,400,099 + RNY4P24
Exon structure

100862664 ENSG00000199605 RNA, Ro-associated Y4 pseudogene 24
78chr13: 52,404,200-52,406,800

GH13J052404



79chr13: 52,410,940-52,412,607

GH13J052410



80chr13: 52,412,602-52,450,678 - VPS36
Exon structure
Hs.109520 51028 ENSG00000136100 vacuolar protein sorting 36 homolog
81chr13: 52,413,935-52,416,517

GH13J052413



82chr13: 52,427,089-52,430,047

GH13J052427



83chr13: 52,446,406-52,446,555

GH13J052446



84chr13: 52,448,292-52,451,295

GH13J052448



85chr13: 52,453,289-52,457,554

GH13J052453



86chr13: 52,454,775-52,455,331 - ENSG00000278238
Exon structure


ENSG00000278238
87chr13: 52,455,360-52,476,631 + CKAP2
Exon structure
Hs.444028; Hs.625768 26586 ENSG00000136108 cytoskeleton associated protein 2
88chr13: 52,458,821-52,459,297

GH13J052458



89chr13: 52,459,826-52,459,975

GH13J052459



90chr13: 52,475,581-52,475,812 - GC13M052475




91chr13: 52,488,993-52,499,305 + ENSG00000244471
Exon structure


ENSG00000244471
92chr13: 52,488,993-52,587,090 + TPTE2P3
Exon structure
Hs.528448 220115 ENSG00000198384 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 3
93chr13: 52,497,097-52,500,195 - ENSG00000280296
Exon structure


ENSG00000280296
94chr13: 52,509,928-52,511,181

GH13J052509



95chr13: 52,514,000-52,514,401

GH13J052514



96chr13: 52,552,097-52,600,372 - LINC00345
Exon structure

105370208 ENSG00000235660 long intergenic non-protein coding RNA 345
97chr13: 52,569,957-52,570,600

GH13J052569



98chr13: 52,571,233-52,571,259 + PIR31837
Exon structure




99chr13: 52,586,985-52,587,016 + PIR38290
Exon structure




100chr13: 52,586,985-52,587,016 + GC13P052591




101chr13: 52,586,985-52,587,016 + GC13P052592




102chr13: 52,598,677-52,601,210

GH13J052598



103chr13: 52,600,042-52,642,542 + ENSG00000273784
Exon structure


ENSG00000273784
104chr13: 52,600,119-52,637,446 + MRPS31P4
Exon structure

100885866 ENSG00000250299 mitochondrial ribosomal protein S31 pseudogene 4
105chr13: 52,606,601-52,607,200

GH13J052606



106chr13: 52,616,457-52,618,600

GH13J052616



107chr13: 52,617,470-52,643,796 + HNRNPA1L2
Exon structure
Hs.447506 144983 ENSG00000139675 heterogeneous nuclear ribonucleoprotein A1-like 2
108chr13: 52,623,600-52,624,596

GH13J052623



109chr13: 52,631,201-52,631,400

GH13J052631



110chr13: 52,650,759-52,654,491

GH13J052650



111chr13: 52,651,305-52,652,279 - ENSG00000273723
Exon structure


ENSG00000273723
112chr13: 52,652,696-52,700,909 + SUGT1
Exon structure
Hs.281902 10910 ENSG00000165416 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone
113chr13: 52,657,546-52,657,574 + PIR56324
Exon structure




114chr13: 52,678,737-52,679,865 - GC13M052678




115chr13: 52,703,264-52,739,812 - CNMD
Exon structure
Hs.421391 11061 ENSG00000136110 chondromodulin
116chr13: 52,728,706-52,728,855

GH13J052728



117chr13: 52,737,991-52,740,323

GH13J052737



118chr13: 52,762,630-52,762,931

GH13J052762



119chr13: 52,779,137-52,779,245

GH13J052779



120chr13: 52,802,959-52,910,810 - GC13M052802




121chr13: 52,809,237-52,810,653 - GC13M052809




122chr13: 52,809,406-52,809,595

GH13J052809



123chr13: 52,810,050-52,810,140 + MIR759
Exon structure

100313778 ENSG00000211579 microRNA 759
124chr13: 52,820,461-52,821,528 + PPIAP26
Exon structure

121981 ENSG00000150276 peptidylprolyl isomerase A pseudogene 26
125chr13: 52,842,889-52,848,641 - PCDH8
Exon structure
Hs.19492 5100 ENSG00000136099 protocadherin 8
126chr13: 52,845,346-52,845,475

GH13J052845



127chr13: 52,847,106-52,847,175

GH13J052847



128chr13: 52,848,606-52,848,755

GH13J052848



129chr13: 52,850,060-52,852,278

GH13J052850



130chr13: 52,879,906-52,881,353

GH13J052879



131chr13: 52,896,759-52,897,675

GH13J052896



132chr13: 52,906,152-52,906,818

GH13J052906



133chr13: 52,920,771-52,921,938

GH13J052920



134chr13: 52,924,254-52,927,675

GH13J052924



135chr13: 52,954,810-52,956,545

GH13J052954



136chr13: 52,961,398-52,961,455

GH13J052961



137chr13: 52,993,036-52,996,868

GH13J052993



138chr13: 52,999,150-52,999,705

GH13J052999



139chr13: 53,000,932-53,002,557

GH13J053000



140chr13: 53,002,916-53,008,948

GH13J053002



141chr13: 53,010,002-53,011,337

GH13J053010



142chr13: 53,015,166-53,015,315

GH13J053015



143chr13: 53,019,406-53,019,495

GH13J053019



144chr13: 53,020,641-53,027,703

GH13J053020



145chr13: 53,028,741-53,052,061 + OLFM4
Exon structure
Hs.508113 10562 ENSG00000102837 olfactomedin 4
146chr13: 53,028,764-53,028,823

GH13J053028



147chr13: 53,030,508-53,033,868

GH13J053030



148chr13: 53,042,565-53,045,481 + GC13P053042




149chr13: 53,044,636-53,045,915

GH13J053044



150chr13: 53,052,826-53,052,955

GH13J053052



151chr13: 53,060,328-53,063,002

GH13J053060



152chr13: 53,068,227-53,069,165

GH13J053068



153chr13: 53,100,786-53,100,935

GH13J053100



154chr13: 53,121,938-53,122,258 + GC13P053121




155chr13: 53,122,034-53,122,308

GH13J053122



156chr13: 53,126,468-53,128,003

GH13J053126



157chr13: 53,131,746-53,151,900 - LINC01065
Exon structure

102723875 ENSG00000237092 long intergenic non-protein coding RNA 1065
158chr13: 53,137,926-53,138,978

GH13J053137



159chr13: 53,151,826-53,151,975

GH13J053151



160chr13: 53,161,426-53,161,495

GH13J053161



161chr13: 53,165,547-53,172,869

GH13J053165



162chr13: 53,173,247-53,175,488

GH13J053173



163chr13: 53,175,931-53,179,877

GH13J053175



164chr13: 53,180,019-53,184,259

GH13J053180



165chr13: 53,187,066-53,189,052

GH13J053187



166chr13: 53,190,118-53,192,440

GH13J053190



167chr13: 53,193,667-53,198,540 + ENSG00000279325
Exon structure


ENSG00000279325
168chr13: 53,196,001-53,199,797

GH13J053196



169chr13: 53,199,981-53,202,753 + PCDH8P1
Exon structure

100133285 ENSG00000225510 protocadherin 8 pseudogene 1
170chr13: 53,201,186-53,201,295

GH13J053201



171chr13: 53,206,483-53,208,522

GH13J053206



172chr13: 53,214,219-53,218,983

GH13J053214



173chr13: 53,240,748-53,240,935

GH13J053240



174chr13: 53,249,273-53,312,221 + GC13P053249




175chr13: 53,250,406-53,250,535

GH13J053250



176chr13: 53,258,077-53,258,372 + RN7SL618P
Exon structure

106479447 ENSG00000241613 RNA, 7SL, cytoplasmic 618, pseudogene
177chr13: 53,276,326-53,276,475

GH13J053276



178chr13: 53,336,824-53,336,915

GH13J053336



179chr13: 53,343,406-53,343,655

GH13J053343



180chr13: 53,345,211-53,410,880 + ENSG00000273919
Exon structure


ENSG00000273919
181chr13: 53,384,037-53,384,322 + GC13P053386




182chr13: 53,384,037-53,384,322 + GC13P053387




183chr13: 53,408,765-53,409,876 - ZNF646P1
Exon structure

100419854 ENSG00000274316 zinc finger protein 646 pseudogene 1
184chr13: 53,495,414-53,495,478

GH13J053495



185chr13: 53,499,569-53,499,581

GH13J053499



186chr13: 53,555,846-53,555,961

GH13J053555



187chr13: 53,555,960-53,564,303 + LOC105370210
Exon structure

105370210

188chr13: 53,592,593-53,602,133 + GC13P053592




189chr13: 53,782,601-53,782,800

GH13J053782



190chr13: 53,787,227-53,822,047 - GC13M053787




191chr13: 53,815,419-53,876,119 + LINC00558
Exon structure
Hs.224691 100861552 ENSG00000261517 long intergenic non-protein coding RNA 558
192chr13: 54,062,383-54,063,718 - GC13M054062




193chr13: 54,115,783-54,132,871 - LINC00458
Exon structure
Hs.351262 100507428 ENSG00000234787 long intergenic non-protein coding RNA 458
194chr13: 54,116,476-54,116,851 + ENSG00000271652
Exon structure


ENSG00000271652
195chr13: 54,131,344-54,133,495

GH13J054131



196chr13: 54,159,694-54,159,712

GH13J054159



197chr13: 54,175,586-54,175,755

GH13J054175



198chr13: 54,185,341-54,186,400

GH13J054185



199chr13: 54,194,407-54,194,696

GH13J054194



200chr13: 54,210,806-54,210,955

GH13J054210



201chr13: 54,226,966-54,227,115

GH13J054226



202chr13: 54,263,715-54,264,706

GH13J054263



203chr13: 54,265,003-54,265,483

GH13J054265



204chr13: 54,266,600-54,268,249

GH13J054266



205chr13: 54,268,406-54,269,387

GH13J054268



206chr13: 54,270,651-54,272,789

GH13J054270



207chr13: 54,272,933-54,274,079

GH13J054272



208chr13: 54,301,206-54,301,355

GH13J054302



209chr13: 54,301,402-54,301,846

GH13J054301



210chr13: 54,311,972-54,312,048 - MIR1297
Exon structure

100302187 ENSG00000283126 microRNA 1297
211chr13: 54,355,147-54,358,349

GH13J054355



212chr13: 54,394,183-54,395,318

GH13J054394



213chr13: 54,440,678-54,441,337 - RPL13AP25
Exon structure

100287887 ENSG00000136149 ribosomal protein L13a pseudogene 25
214chr13: 54,634,442-54,634,774

GH13J054634



215chr13: 54,637,466-54,637,615

GH13J054637



216chr13: 54,690,839-54,697,881 + GC13P054691




217chr13: 54,800,172-54,841,989 + LOC105370213
Exon structure

105370213

218chr13: 54,899,849-54,906,129 + GC13P054899




219chr13: 54,918,657-54,929,396 + GC13P054918




220chr13: 54,930,469-54,938,913 - GC13M054930




221chr13: 54,940,843-54,986,719 + ENSG00000277047
Exon structure


ENSG00000277047
222chr13: 54,941,338-54,941,425

GH13J054941



223chr13: 54,944,262-54,945,991

GH13J054944



224chr13: 54,946,086-54,946,335

GH13J054946



225chr13: 54,976,551-54,977,652 - GC13M054976




226chr13: 54,988,729-54,989,623 - GC13M054988




227chr13: 54,999,197-55,000,775

GH13J054999



228chr13: 55,000,817-55,002,709

GH13J055000



229chr13: 55,013,213-55,014,649

GH13J055013



230chr13: 55,046,703-55,047,232 - GC13M055046




231chr13: 55,051,714-55,051,741 + PIR52645
Exon structure




232chr13: 55,062,945-55,161,490 + LINC02335
Exon structure

107984565 ENSG00000278630 long intergenic non-protein coding RNA 2335
233chr13: 55,076,863-55,081,784 + GC13P055076




234chr13: 55,086,822-55,087,375

GH13J055086



235chr13: 55,128,285-55,128,444 + ENSG00000275071
Exon structure


ENSG00000275071
236chr13: 55,174,454-55,174,548 + MIR5007
Exon structure

100846996 ENSG00000264387 microRNA 5007
237chr13: 55,229,687-55,230,549

GH13J055229



238chr13: 55,230,606-55,230,755

GH13J055230



239chr13: 55,245,106-55,245,275

GH13J055245



240chr13: 55,245,386-55,245,406

GH13J055246



241chr13: 55,245,426-55,245,575

GH13J055247



242chr13: 55,320,835-55,321,853 + GC13P055320




243chr13: 55,362,034-55,362,333

GH13J055362



244chr13: 55,384,622-55,384,763

GH13J055384



245chr13: 55,388,461-55,390,620 + GC13P055388




246chr13: 55,432,565-55,439,173 + GC13P055432




247chr13: 55,436,838-55,437,645

GH13J055436



248chr13: 55,454,551-55,464,932 - GC13M055454




249chr13: 55,510,725-55,511,310 - GC13M055511




250chr13: 55,535,697-55,583,524 - ENSG00000274090
Exon structure


ENSG00000274090
251chr13: 55,563,986-55,564,675

GH13J055563



252chr13: 55,571,386-55,571,535

GH13J055572



253chr13: 55,571,646-55,571,795

GH13J055571



254chr13: 55,574,905-55,575,520

GH13J055574



255chr13: 55,575,953-55,578,316

GH13J055575



256chr13: 55,578,346-55,578,348

GH13J055578



257chr13: 55,583,566-55,584,557

GH13J055583



258chr13: 55,652,206-55,655,029

GH13J055652



259chr13: 55,654,619-55,659,848 + GC13P055654




260chr13: 55,655,801-55,656,000

GH13J055655



261chr13: 55,659,472-55,661,825

GH13J055659



262chr13: 55,663,874-55,664,515

GH13J055663



263chr13: 55,673,908-55,674,350

GH13J055673



264chr13: 55,817,890-55,863,425 + GC13P055817




265chr13: 55,822,524-55,823,066 + GC13P055822




266chr13: 55,822,524-55,823,066 + GC13P055823




267chr13: 55,863,838-55,863,866 + PIR47898
Exon structure